Variant report

Variant	rs10955272
Chromosome Location	chr8:102750494-102750495
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:102748697..102751246-chr8:102767515..102769264,2	MCF-7	breast:
2	chr8:102746868..102749191-chr8:102749399..102751550,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10110736	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs10955273	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1113543	0.84[AMR][1000 genomes]
rs16868341	0.95[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs16868354	0.85[ASN][1000 genomes]
rs16868359	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs16868362	0.85[ASN][1000 genomes]
rs16868373	1.00[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs16868374	1.00[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs16868417	0.95[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs16868425	0.82[ASN][1000 genomes]
rs16868426	0.95[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs16868430	0.85[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs56907672	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs57368614	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs58241619	0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs58303849	0.84[AMR][1000 genomes]
rs60677697	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs6984466	0.81[ASN][1000 genomes]
rs73275514	0.85[ASN][1000 genomes]
rs73699584	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs73699930	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs73699931	0.95[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs73699933	0.95[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs73699935	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs73699938	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9642973	0.84[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102713800-102768400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:102730000-102756000	Weak transcription	Psoas Muscle	Psoas
3	chr8:102731600-102752600	Weak transcription	Aorta	Aorta
4	chr8:102732000-102762400	Weak transcription	Lung	lung
5	chr8:102735000-102760600	Weak transcription	Liver	Liver
6	chr8:102735400-102752800	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr8:102735400-102757800	Weak transcription	Fetal Stomach	stomach
8	chr8:102735400-102768400	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr8:102735400-102768400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr8:102735800-102759200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr8:102738800-102753000	Weak transcription	GM12878-XiMat	blood
12	chr8:102738800-102756800	Weak transcription	Fetal Brain Female	brain
13	chr8:102742200-102759200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr8:102743600-102750800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr8:102743800-102761800	Weak transcription	Primary T cells fromperipheralblood	blood
16	chr8:102744000-102768000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr8:102744400-102752200	Strong transcription	Fetal Muscle Leg	muscle
18	chr8:102745000-102750800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr8:102746400-102758000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr8:102746600-102763800	Weak transcription	Left Ventricle	heart
21	chr8:102746600-102771000	Weak transcription	Fetal Heart	heart
22	chr8:102747600-102768400	Weak transcription	Fetal Kidney	kidney
23	chr8:102748800-102752200	Strong transcription	Fetal Muscle Trunk	muscle
24	chr8:102750200-102757600	Weak transcription	Ovary	ovary
25	chr8:102750400-102756600	Weak transcription	Cortex derived primary cultured neurospheres	brain
26	chr8:102750400-102757600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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