The 2.0 version of rSNPBase

Variant report

Variant rs58303849
Chromosome Location chr8:102771167-102771168
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:102761400-102781000 Weak transcription Liver Liver
2 chr8:102768800-102772000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr8:102768800-102772000 Weak transcription Fetal Kidney kidney
4 chr8:102768800-102772000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr8:102768800-102772000 Weak transcription K562 blood
6 chr8:102768800-102772200 Weak transcription Aorta Aorta
7 chr8:102768800-102772200 Weak transcription Lung lung
8 chr8:102769000-102771400 Weak transcription Fetal Lung lung
9 chr8:102769000-102771800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr8:102769000-102772200 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr8:102769000-102774800 Enhancers Pancreatic Islets Pancreatic Islet
12 chr8:102769200-102771200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr8:102769200-102771200 Weak transcription Fetal Muscle Leg muscle
14 chr8:102769200-102771800 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr8:102769200-102772000 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr8:102769200-102772000 Weak transcription Fetal Muscle Trunk muscle
17 chr8:102769600-102803000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr8:102770200-102771200 Enhancers Duodenum Smooth Muscle Duodenum
19 chr8:102770200-102771200 Enhancers Pancreas Pancrea
20 chr8:102770200-102774200 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr8:102770200-102774200 Enhancers Brain Cingulate Gyrus brain
22 chr8:102770200-102774200 Enhancers Rectal Smooth Muscle rectum
23 chr8:102770400-102771200 Enhancers Brain Hippocampus Middle brain
24 chr8:102770400-102771400 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr8:102770400-102772600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr8:102770400-102772800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr8:102770400-102772800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
28 chr8:102770400-102773800 Enhancers Right Atrium heart
29 chr8:102770400-102774000 Enhancers Brain Angular Gyrus brain
30 chr8:102770400-102774000 Enhancers Brain Substantia Nigra brain
31 chr8:102770400-102774200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr8:102770400-102774200 Enhancers Fetal Stomach stomach
33 chr8:102770400-102774400 Enhancers Cortex derived primary cultured neurospheres brain
34 chr8:102770600-102771800 Weak transcription Left Ventricle heart
35 chr8:102770600-102773600 Enhancers Brain Inferior Temporal Lobe brain
36 chr8:102770600-102786800 Weak transcription Esophagus oesophagus
37 chr8:102770800-102771600 Weak transcription Colon Smooth Muscle Colon
38 chr8:102770800-102772000 Weak transcription Stomach Smooth Muscle stomach
39 chr8:102770800-102774000 Enhancers Adipose Nuclei Adipose
40 chr8:102770800-102774400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr8:102771000-102771200 Enhancers Brain Anterior Caudate brain
42 chr8:102771000-102771600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr8:102771000-102771800 Weak transcription Ovary ovary
44 chr8:102771000-102772600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr8:102771000-102772600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
46 chr8:102771000-102773400 Enhancers Fetal Heart heart
47 chr8:102771000-102774200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015