The 2.0 version of rSNPBase

Variant report

Variant rs58467138
Chromosome Location chr6:149680816-149680817
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149641200-149681400 Weak transcription Fetal Stomach stomach
2 chr6:149649400-149689400 Weak transcription Fetal Brain Female brain
3 chr6:149656800-149681400 Weak transcription Psoas Muscle Psoas
4 chr6:149656800-149682400 Weak transcription Lung lung
5 chr6:149656800-149694400 Weak transcription Placenta Placenta
6 chr6:149657800-149683800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr6:149657800-149691200 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr6:149658000-149681400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr6:149658000-149695400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr6:149658200-149691000 Weak transcription NHDF-Ad bronchial
11 chr6:149658800-149692400 Weak transcription Fetal Kidney kidney
12 chr6:149659200-149685200 Weak transcription Ovary ovary
13 chr6:149659200-149691400 Weak transcription Fetal Muscle Trunk muscle
14 chr6:149659600-149684200 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr6:149660400-149682200 Weak transcription Fetal Muscle Leg muscle
16 chr6:149660400-149682400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr6:149660400-149685600 Weak transcription Pancreas Pancrea
18 chr6:149660400-149699200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr6:149662200-149694800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr6:149663400-149685400 Weak transcription Fetal Lung lung
21 chr6:149663800-149685400 Weak transcription Brain Anterior Caudate brain
22 chr6:149664000-149682600 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr6:149664000-149687400 Weak transcription HSMM muscle
24 chr6:149664000-149694400 Weak transcription Duodenum Mucosa Duodenum
25 chr6:149664600-149681400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr6:149664600-149687400 Weak transcription Right Ventricle heart
27 chr6:149666200-149685400 Weak transcription Brain Cingulate Gyrus brain
28 chr6:149666400-149683400 Weak transcription NHEK skin
29 chr6:149667400-149684200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr6:149667400-149685600 Weak transcription Stomach Mucosa stomach
31 chr6:149667600-149691000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr6:149668400-149682400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr6:149668600-149681400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr6:149668600-149683400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr6:149669000-149685400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr6:149669400-149690400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr6:149670600-149681400 Weak transcription Fetal Intestine Small intestine
38 chr6:149671600-149681600 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr6:149671600-149681800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr6:149672400-149686800 Weak transcription Primary B cells from peripheral blood blood
41 chr6:149674200-149691000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr6:149674400-149681600 Weak transcription Adipose Nuclei Adipose
43 chr6:149674400-149682200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr6:149674600-149681400 Weak transcription Left Ventricle heart
45 chr6:149674600-149681400 Weak transcription GM12878-XiMat blood
46 chr6:149674600-149681600 Weak transcription Fetal Thymus thymus
47 chr6:149674600-149681600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr6:149674600-149684400 Weak transcription Small Intestine intestine
49 chr6:149674600-149691800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr6:149674600-149699200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015