The 2.0 version of rSNPBase

Variant report

Variant rs58522285
Chromosome Location chr5:35780079-35780080
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:35771000-35781800 Weak transcription Brain Anterior Caudate brain
2 chr5:35772400-35780600 Weak transcription HSMM muscle
3 chr5:35774600-35780800 Weak transcription NHDF-Ad bronchial
4 chr5:35774600-35781000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr5:35776800-35780400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr5:35777000-35780400 Enhancers Primary T killer naive cells fromperipheralblood blood
7 chr5:35777000-35780600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr5:35777000-35780800 Weak transcription HUVEC blood vessel
9 chr5:35777200-35780400 Enhancers Primary T helper cells fromperipheralblood blood
10 chr5:35777400-35780600 Weak transcription NHLF lung
11 chr5:35777600-35780600 Weak transcription Muscle Satellite Cultured Cells --
12 chr5:35777800-35780600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr5:35778000-35780800 Enhancers Thymus Thymus
14 chr5:35778000-35782200 Enhancers Fetal Thymus thymus
15 chr5:35778000-35787800 Enhancers Dnd41 blood
16 chr5:35778200-35780600 Weak transcription Osteobl bone
17 chr5:35778200-35781400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr5:35778600-35780400 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr5:35778600-35780400 Enhancers Primary T helper 17 cells PMA-I stimulated --
20 chr5:35778600-35780400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
21 chr5:35778800-35784800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr5:35779200-35781000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
23 chr5:35779400-35782200 Enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr5:35779400-35782800 Flanking Active TSS Primary T cells from cord blood blood
25 chr5:35779800-35780200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr5:35779800-35780200 Weak transcription Primary T cells fromperipheralblood blood
27 chr5:35780000-35780800 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr5:35780000-35780800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
29 chr5:35780000-35781000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
30 chr5:35780000-35782200 Enhancers Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015