Variant report

Variant	rs58698475
Chromosome Location	chr7:41065244-41065245
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10486701	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10486702	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10486704	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11766919	0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11767383	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11770716	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11771855	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11771896	0.82[ASN][1000 genomes]
rs12111988	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12113722	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16880258	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17171801	0.86[ASN][1000 genomes]
rs17171803	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17171805	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17715435	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17771935	0.82[ASN][1000 genomes]
rs17772025	0.83[ASN][1000 genomes]
rs17772091	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17772212	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1962786	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2158812	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4141244	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4141245	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58574391	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61210370	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62452912	0.82[ASN][1000 genomes]
rs62452914	0.86[ASN][1000 genomes]
rs6947406	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs736763	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73688222	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73688224	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7778307	0.81[ASN][1000 genomes]
rs7803955	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7810451	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:41048600-41065600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr7:41060800-41065800	Weak transcription	HSMMtube	muscle
3	chr7:41060800-41066600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr7:41062800-41082200	Weak transcription	Aorta	Aorta
5	chr7:41064000-41066600	Weak transcription	Osteobl	bone

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