Variant report

Variant	rs12113722
Chromosome Location	chr7:41065424-41065425
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10266818	0.80[ASN][1000 genomes]
rs10275188	0.80[ASN][1000 genomes]
rs10486701	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10486702	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10486704	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11766919	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11767383	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11770716	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11771855	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11771896	0.84[ASN][1000 genomes]
rs12111988	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16880258	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17171801	0.88[ASN][1000 genomes]
rs17171803	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17171805	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17715211	0.80[CHB][hapmap];0.90[JPT][hapmap]
rs17715435	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17771935	0.84[ASN][1000 genomes]
rs17772025	0.85[ASN][1000 genomes]
rs17772037	0.81[ASN][1000 genomes]
rs17772091	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17772212	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1962786	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2158812	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4141244	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4141245	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58574391	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58698475	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61210370	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62452912	0.84[ASN][1000 genomes]
rs62452914	0.88[ASN][1000 genomes]
rs6947406	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6970735	0.90[JPT][hapmap]
rs736763	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73688222	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73688224	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7778307	0.83[ASN][1000 genomes]
rs7803955	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7810451	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:41048600-41065600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr7:41060800-41065800	Weak transcription	HSMMtube	muscle
3	chr7:41060800-41066600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr7:41062800-41082200	Weak transcription	Aorta	Aorta
5	chr7:41064000-41066600	Weak transcription	Osteobl	bone

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links