The 2.0 version of rSNPBase

Variant report

Variant rs59554065
Chromosome Location chr3:136435352-136435353
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136390800-136447800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:136411000-136444400 Weak transcription Fetal Lung lung
3 chr3:136413400-136447200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr3:136413800-136447800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr3:136415200-136444600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr3:136415200-136446000 Weak transcription Thymus Thymus
7 chr3:136415400-136444400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr3:136415400-136444400 Weak transcription Duodenum Mucosa Duodenum
9 chr3:136415400-136447200 Weak transcription NHDF-Ad bronchial
10 chr3:136415400-136447600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr3:136416200-136435600 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr3:136416200-136444200 Weak transcription Primary B cells from cord blood blood
13 chr3:136416800-136444200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr3:136418000-136435400 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr3:136418000-136444400 Weak transcription Primary B cells from peripheral blood blood
16 chr3:136418200-136435400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:136420200-136435600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr3:136420600-136439000 Weak transcription Colon Smooth Muscle Colon
19 chr3:136421600-136444200 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr3:136422400-136438200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr3:136423400-136444600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr3:136425000-136436200 Weak transcription Left Ventricle heart
23 chr3:136425800-136435400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr3:136426000-136440800 Weak transcription Brain Germinal Matrix brain
25 chr3:136426600-136439200 Weak transcription Adipose Nuclei Adipose
26 chr3:136426600-136453400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr3:136426800-136441400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr3:136426800-136444400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr3:136427800-136452400 Weak transcription HUVEC blood vessel
30 chr3:136428000-136438600 Weak transcription Fetal Stomach stomach
31 chr3:136428200-136435600 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr3:136428200-136437000 Weak transcription Spleen Spleen
33 chr3:136428200-136438200 Weak transcription Placenta Amnion Placenta Amnion
34 chr3:136428600-136444800 Weak transcription Primary hematopoietic stem cells blood
35 chr3:136428800-136438600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr3:136428800-136440800 Weak transcription Fetal Intestine Large intestine
37 chr3:136429400-136441000 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr3:136429400-136443600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr3:136429400-136444400 Weak transcription A549 lung
40 chr3:136429400-136447200 Weak transcription Osteobl bone
41 chr3:136429600-136444600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr3:136430000-136435400 Enhancers Primary monocytes fromperipheralblood blood
43 chr3:136430000-136438000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr3:136430400-136441000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr3:136430400-136444400 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr3:136430600-136443600 Weak transcription GM12878-XiMat blood
47 chr3:136431000-136444400 Weak transcription Liver Liver
48 chr3:136431000-136454600 Weak transcription Hela-S3 cervix
49 chr3:136431600-136443400 Weak transcription HepG2 liver
50 chr3:136431600-136443600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015