The 2.0 version of rSNPBase

Variant report

Variant rs59882147
Chromosome Location chr11:10918141-10918142
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10901600-10920800 Weak transcription Pancreas Pancrea
2 chr11:10906200-10919600 Weak transcription NHEK skin
3 chr11:10914200-10920000 Weak transcription Gastric stomach
4 chr11:10914400-10919000 Weak transcription Primary monocytes fromperipheralblood blood
5 chr11:10914400-10921200 Weak transcription Brain Hippocampus Middle brain
6 chr11:10914800-10918200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
7 chr11:10914800-10919800 Weak transcription Right Ventricle heart
8 chr11:10915400-10919600 Weak transcription HMEC breast
9 chr11:10915400-10920400 Enhancers Psoas Muscle Psoas
10 chr11:10915600-10919000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr11:10915800-10919600 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr11:10915800-10919800 Weak transcription HSMMtube muscle
13 chr11:10915800-10920200 Weak transcription Stomach Mucosa stomach
14 chr11:10916000-10919600 Weak transcription NH-A brain
15 chr11:10916000-10919800 Weak transcription Rectal Smooth Muscle rectum
16 chr11:10916000-10920000 Weak transcription Osteobl bone
17 chr11:10916200-10919600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr11:10916200-10919600 Weak transcription Hela-S3 cervix
19 chr11:10916200-10919800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr11:10916200-10919800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr11:10916200-10919800 Weak transcription Right Atrium heart
22 chr11:10916200-10919800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr11:10916200-10920000 Weak transcription Muscle Satellite Cultured Cells --
24 chr11:10916400-10919600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr11:10916400-10919600 Weak transcription Stomach Smooth Muscle stomach
26 chr11:10916600-10919000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr11:10916600-10920400 Weak transcription Fetal Lung lung
28 chr11:10916600-10920800 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr11:10917000-10919200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr11:10917000-10919200 Weak transcription Placenta Amnion Placenta Amnion
31 chr11:10917000-10920200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr11:10917000-10920400 Weak transcription Fetal Intestine Small intestine
33 chr11:10917200-10919600 Weak transcription Placenta Placenta
34 chr11:10917600-10918200 Enhancers A549 lung
35 chr11:10917800-10918200 Enhancers Left Ventricle heart
36 chr11:10917800-10918200 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
37 chr11:10917800-10918400 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
38 chr11:10917800-10918800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr11:10917800-10919600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr11:10917800-10919800 Enhancers K562 blood
41 chr11:10918000-10918400 Enhancers Fetal Intestine Large intestine
42 chr11:10918000-10918600 Weak transcription Fetal Muscle Leg muscle
43 chr11:10918000-10918800 Weak transcription Esophagus oesophagus
44 chr11:10918000-10919000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr11:10918000-10919000 Weak transcription NHLF lung
46 chr11:10918000-10919400 Enhancers NHDF-Ad bronchial
47 chr11:10918000-10921000 Enhancers Fetal Heart heart

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Last update: Aug 31, 2015