Variant report

Variant rs60158152
Chromosome Location chr3:17535666-17535667
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17512000-17538000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr3:17516600-17537600 Weak transcription Colon Smooth Muscle Colon
3 chr3:17520200-17537000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:17522600-17537200 Weak transcription Fetal Kidney kidney
5 chr3:17522800-17535800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:17522800-17541400 Weak transcription Ovary ovary
7 chr3:17523000-17541400 Weak transcription Pancreas Pancrea
8 chr3:17523000-17570000 Weak transcription Spleen Spleen
9 chr3:17523200-17556200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr3:17530000-17537400 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr3:17530600-17538000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr3:17530600-17587600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr3:17531600-17535800 Weak transcription NHDF-Ad bronchial
14 chr3:17531600-17536000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr3:17532000-17542000 Weak transcription A549 lung
16 chr3:17532600-17543800 Weak transcription Liver Liver
17 chr3:17533200-17550600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr3:17533400-17549800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr3:17533600-17547200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr3:17534000-17546800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr3:17534000-17559800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr3:17534200-17561600 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr3:17534800-17536600 Strong transcription Primary B cells from peripheral blood blood
24 chr3:17535000-17536000 Strong transcription Fetal Intestine Large intestine
25 chr3:17535000-17536200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr3:17535000-17536400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr3:17535000-17536600 Strong transcription Primary B cells from cord blood blood
28 chr3:17535000-17538800 Weak transcription Duodenum Mucosa Duodenum
29 chr3:17535200-17536200 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr3:17535200-17536600 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr3:17535200-17536800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr3:17535400-17536400 ZNF genes & repeats Primary hematopoietic stem cells blood
33 chr3:17535400-17536400 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr3:17535400-17536600 ZNF genes & repeats Fetal Muscle Trunk muscle
35 chr3:17535400-17536800 ZNF genes & repeats Primary monocytes fromperipheralblood blood
36 chr3:17535600-17535800 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
37 chr3:17535600-17536000 Enhancers Aorta Aorta
38 chr3:17535600-17536000 Strong transcription Fetal Lung lung
39 chr3:17535600-17536000 Enhancers Left Ventricle heart
40 chr3:17535600-17536400 Strong transcription Dnd41 blood
41 chr3:17535600-17536600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr3:17535600-17536600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
43 chr3:17535600-17536600 ZNF genes & repeats Fetal Muscle Leg muscle
44 chr3:17535600-17536600 ZNF genes & repeats Fetal Stomach stomach
45 chr3:17535600-17536800 ZNF genes & repeats Fetal Intestine Small intestine
46 chr3:17535600-17552000 Weak transcription Primary T cells from cord blood blood

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