Variant report

Variant rs17043565
Chromosome Location chr3:17444540-17444541
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17398800-17447000 Weak transcription Fetal Stomach stomach
2 chr3:17402600-17451000 Weak transcription Gastric stomach
3 chr3:17403200-17449200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr3:17404200-17449200 Weak transcription Esophagus oesophagus
5 chr3:17410200-17445200 Weak transcription Right Ventricle heart
6 chr3:17410200-17445600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr3:17410200-17447200 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr3:17410200-17451400 Weak transcription Brain Angular Gyrus brain
9 chr3:17410400-17447800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr3:17411200-17467400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr3:17411800-17449200 Weak transcription Stomach Smooth Muscle stomach
12 chr3:17412800-17450600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr3:17413400-17445000 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr3:17413400-17453400 Weak transcription Psoas Muscle Psoas
15 chr3:17413600-17445400 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr3:17413600-17447600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr3:17413600-17449400 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr3:17415200-17448000 Weak transcription HSMM muscle
19 chr3:17420800-17454800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr3:17424000-17445000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr3:17426600-17449200 Weak transcription HepG2 liver
22 chr3:17427000-17449000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr3:17427400-17445600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr3:17427400-17447400 Weak transcription A549 lung
25 chr3:17428200-17444600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr3:17428600-17446000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr3:17428800-17451400 Weak transcription Fetal Thymus thymus
28 chr3:17431000-17447600 Weak transcription Muscle Satellite Cultured Cells --
29 chr3:17431200-17446000 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr3:17431200-17447600 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr3:17431400-17445200 Weak transcription Colon Smooth Muscle Colon
32 chr3:17431400-17453200 Weak transcription Pancreas Pancrea
33 chr3:17431800-17448000 Weak transcription Fetal Muscle Leg muscle
34 chr3:17433000-17457200 Weak transcription Ovary ovary
35 chr3:17433400-17445400 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr3:17433600-17445800 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr3:17434000-17447400 Weak transcription Placenta Placenta
38 chr3:17435200-17445800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr3:17436000-17447800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr3:17438000-17445400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr3:17439200-17453200 Weak transcription Aorta Aorta
42 chr3:17440800-17462400 Weak transcription Primary hematopoietic stem cells blood
43 chr3:17441200-17445600 Weak transcription Dnd41 blood
44 chr3:17441400-17451400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr3:17441600-17446800 Weak transcription Fetal Kidney kidney
46 chr3:17441800-17451200 Weak transcription Brain Hippocampus Middle brain
47 chr3:17442000-17446600 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr3:17442200-17448000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr3:17442400-17445600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr3:17442400-17447800 Weak transcription Breast Myoepithelial Primary Cells Breast

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