Variant report
| Variant | rs12374023 |
|---|---|
| Chromosome Location | chr3:17667076-17667077 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:17632400-17668200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 2 | chr3:17633000-17667600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 3 | chr3:17633800-17676600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 4 | chr3:17639200-17676800 | Weak transcription | Ovary | ovary |
| 5 | chr3:17647000-17670800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 6 | chr3:17647400-17673800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr3:17647800-17673000 | Weak transcription | Psoas Muscle | Psoas |
| 8 | chr3:17650800-17681200 | Weak transcription | Aorta | Aorta |
| 9 | chr3:17651400-17673200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 10 | chr3:17656000-17681200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 11 | chr3:17657600-17673200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 12 | chr3:17657800-17668200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 13 | chr3:17657800-17681200 | Weak transcription | Colon Smooth Muscle | Colon |
| 14 | chr3:17658000-17667800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 15 | chr3:17658000-17669000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 16 | chr3:17658200-17668400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 17 | chr3:17658400-17668000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 18 | chr3:17658600-17667600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 19 | chr3:17658800-17677200 | Weak transcription | Small Intestine | intestine |
| 20 | chr3:17659400-17676800 | Weak transcription | Right Atrium | heart |
| 21 | chr3:17659800-17672800 | Weak transcription | Fetal Heart | heart |
| 22 | chr3:17660200-17668000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 23 | chr3:17660400-17667200 | Weak transcription | Spleen | Spleen |
| 24 | chr3:17660400-17667800 | Weak transcription | Brain Anterior Caudate | brain |
| 25 | chr3:17660400-17668000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 26 | chr3:17660400-17668000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 27 | chr3:17660400-17668000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 28 | chr3:17660400-17668400 | Weak transcription | Gastric | stomach |
| 29 | chr3:17660400-17669600 | Weak transcription | Lung | lung |
| 30 | chr3:17660400-17671000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 31 | chr3:17660400-17671200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 32 | chr3:17660400-17673200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 33 | chr3:17660400-17673200 | Weak transcription | Fetal Muscle Leg | muscle |
| 34 | chr3:17660400-17674600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 35 | chr3:17660400-17679800 | Weak transcription | Adipose Nuclei | Adipose |
| 36 | chr3:17660600-17674000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 37 | chr3:17662000-17671600 | Weak transcription | Fetal Intestine Small | intestine |
| 38 | chr3:17663600-17668000 | Weak transcription | A549 | lung |
| 39 | chr3:17664000-17667800 | Weak transcription | Primary T cells from cord blood | blood |
| 40 | chr3:17664000-17668000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 41 | chr3:17664000-17668000 | Weak transcription | GM12878-XiMat | blood |
| 42 | chr3:17664000-17671400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 43 | chr3:17664000-17671400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 44 | chr3:17664000-17674600 | Weak transcription | Left Ventricle | heart |
| 45 | chr3:17664000-17679000 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 46 | chr3:17664600-17668000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 47 | chr3:17664600-17670000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 48 | chr3:17664800-17668000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 49 | chr3:17664800-17670200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 50 | chr3:17664800-17671400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
