The 2.0 version of rSNPBase

Variant report

Variant rs61806091
Chromosome Location chr1:172360695-172360696
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172346600-172367400 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr1:172349600-172362000 Weak transcription Left Ventricle heart
3 chr1:172349800-172363400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:172350400-172362400 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:172350400-172362600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:172351400-172363000 Weak transcription A549 lung
7 chr1:172351800-172363400 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:172352200-172363200 Weak transcription Fetal Intestine Large intestine
9 chr1:172352400-172386400 Weak transcription Psoas Muscle Psoas
10 chr1:172353000-172362600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:172353600-172366400 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:172354600-172364000 Weak transcription Fetal Brain Female brain
13 chr1:172355000-172363800 Weak transcription Lung lung
14 chr1:172355600-172364000 Weak transcription Fetal Brain Male brain
15 chr1:172356600-172367400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:172358800-172361400 Enhancers Fetal Muscle Leg muscle
17 chr1:172359000-172361000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:172359000-172361000 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr1:172359200-172360800 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr1:172359200-172360800 Enhancers HUES64 Cell Line embryonic stem cell
21 chr1:172359400-172360800 Enhancers HUES6 Cell Line embryonic stem cell
22 chr1:172359400-172360800 Enhancers Muscle Satellite Cultured Cells --
23 chr1:172359400-172360800 Enhancers HUVEC blood vessel
24 chr1:172359400-172361000 Enhancers HUES48 Cell Line embryonic stem cell
25 chr1:172359400-172361000 Enhancers Fetal Stomach stomach
26 chr1:172359400-172361000 Enhancers Rectal Mucosa Donor 29 rectum
27 chr1:172359400-172361200 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr1:172359600-172360800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:172359600-172360800 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr1:172359800-172360800 Flanking Active TSS Primary B cells from peripheral blood blood
31 chr1:172359800-172360800 Enhancers Brain Angular Gyrus brain
32 chr1:172359800-172361000 Enhancers Primary T helper cells fromperipheralblood blood
33 chr1:172359800-172363400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:172359800-172363600 Weak transcription Fetal Intestine Small intestine
35 chr1:172360000-172361000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:172360000-172361000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr1:172360000-172362600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:172360000-172363200 Enhancers Brain Hippocampus Middle brain
39 chr1:172360000-172363400 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr1:172360000-172368200 Weak transcription HepG2 liver
41 chr1:172360200-172361600 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:172360200-172362000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:172360200-172362000 Weak transcription Brain Substantia Nigra brain
44 chr1:172360200-172362600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr1:172360200-172363400 Weak transcription Esophagus oesophagus
46 chr1:172360200-172363400 Weak transcription Fetal Lung lung
47 chr1:172360200-172363400 Weak transcription Placenta Placenta
48 chr1:172360200-172363400 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr1:172360200-172363400 Weak transcription HSMM muscle
50 chr1:172360200-172364200 Enhancers Fetal Kidney kidney

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Last update: Aug 31, 2015