Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:172379952..172381876-chr1:172385382..172387129,2	MCF-7	breast:
2	chr1:172374826..172377072-chr1:172379296..172381158,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10489286	1.00[ASN][1000 genomes]
rs1052256	1.00[ASN][1000 genomes]
rs10752953	1.00[ASN][1000 genomes]
rs1132148	1.00[ASN][1000 genomes]
rs12031216	1.00[ASN][1000 genomes]
rs17277932	1.00[ASN][1000 genomes]
rs17369011	1.00[ASN][1000 genomes]
rs2230471	0.85[MKK][hapmap]
rs2422139	1.00[ASN][1000 genomes]
rs4916185	1.00[CEU][hapmap];1.00[GIH][hapmap];0.90[MKK][hapmap];0.90[TSI][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4916256	1.00[ASN][1000 genomes]
rs56259646	1.00[ASN][1000 genomes]
rs56340136	1.00[ASN][1000 genomes]
rs61806074	1.00[ASN][1000 genomes]
rs61806089	1.00[ASN][1000 genomes]
rs61806090	1.00[ASN][1000 genomes]
rs61806091	1.00[ASN][1000 genomes]
rs6660051	1.00[ASW][hapmap];0.87[LWK][hapmap];0.93[YRI][hapmap];0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6674018	1.00[ASN][1000 genomes]
rs9425307	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9425309	1.00[CEU][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9425314	1.00[ASN][1000 genomes]
rs9425315	1.00[ASN][1000 genomes]
rs9425610	1.00[ASN][1000 genomes]
rs9425618	0.85[MKK][hapmap]
rs978875	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172352400-172386400	Weak transcription	Psoas Muscle	Psoas
2	chr1:172368400-172390800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr1:172370200-172385600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr1:172372800-172381600	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr1:172373000-172390800	Weak transcription	Brain Hippocampus Middle	brain
6	chr1:172373000-172390800	Weak transcription	Brain Substantia Nigra	brain
7	chr1:172373000-172411800	Weak transcription	Brain Angular Gyrus	brain
8	chr1:172375400-172383600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr1:172377200-172384400	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr1:172378400-172385200	Weak transcription	Fetal Kidney	kidney
11	chr1:172378600-172381200	Weak transcription	NHEK	skin
12	chr1:172378600-172382800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr1:172379400-172383600	Weak transcription	NHDF-Ad	bronchial
14	chr1:172379400-172386600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr1:172379600-172383200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr1:172380800-172381400	Enhancers	GM12878-XiMat	blood

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