The 2.0 version of rSNPBase

Variant report

Variant rs61884270
Chromosome Location chr11:46652742-46652743
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46640000-46664200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:46640000-46670800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr11:46640600-46667200 Weak transcription H9 Cell Line embryonic stem cell
4 chr11:46640600-46667200 Weak transcription Psoas Muscle Psoas
5 chr11:46640800-46653400 Weak transcription HUVEC blood vessel
6 chr11:46640800-46664400 Weak transcription GM12878-XiMat blood
7 chr11:46640800-46670600 Weak transcription Fetal Heart heart
8 chr11:46640800-46670800 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr11:46640800-46673000 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr11:46641000-46654400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr11:46641000-46657000 Strong transcription Fetal Stomach stomach
12 chr11:46641200-46653800 Weak transcription HMEC breast
13 chr11:46641400-46653400 Strong transcription Fetal Intestine Small intestine
14 chr11:46641400-46667400 Weak transcription Esophagus oesophagus
15 chr11:46641600-46655800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr11:46641600-46662600 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr11:46641600-46663800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
18 chr11:46641800-46660800 Weak transcription Stomach Mucosa stomach
19 chr11:46641800-46663200 Strong transcription Primary monocytes fromperipheralblood blood
20 chr11:46641800-46680800 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr11:46642000-46654400 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr11:46642000-46685000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr11:46642200-46654400 Strong transcription Primary B cells from peripheral blood blood
24 chr11:46642400-46653200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr11:46642600-46654600 Strong transcription Fetal Intestine Large intestine
26 chr11:46643000-46653600 Strong transcription Thymus Thymus
27 chr11:46643000-46654200 Strong transcription Primary T cells from cord blood blood
28 chr11:46643000-46655800 Strong transcription Primary T cells fromperipheralblood blood
29 chr11:46643400-46652800 Weak transcription NHEK skin
30 chr11:46643600-46690800 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr11:46644600-46667400 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr11:46644800-46666800 Weak transcription Placenta Amnion Placenta Amnion
33 chr11:46646400-46653400 Strong transcription Brain Germinal Matrix brain
34 chr11:46646600-46654000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr11:46647200-46667400 Weak transcription Pancreas Pancrea
36 chr11:46647200-46670800 Weak transcription Aorta Aorta
37 chr11:46647400-46666600 Weak transcription A549 lung
38 chr11:46647400-46670800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr11:46647600-46654400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr11:46647600-46667400 Weak transcription Right Ventricle heart
41 chr11:46647600-46670200 Weak transcription NHLF lung
42 chr11:46648000-46653000 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr11:46648200-46653000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr11:46649400-46653200 Strong transcription Lung lung
45 chr11:46649400-46654400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr11:46649600-46654400 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr11:46649800-46653200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr11:46649800-46654400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr11:46649800-46654400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr11:46649800-46655800 Strong transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015