Variant report

Variant	rs61955132
Chromosome Location	chr12:121874920-121874921
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:121871998..121875196-chr12:121881488..121886297,4	K562	blood:
2	chr12:121874590..121876262-chr12:121876635..121878182,2	K562	blood:

Extended variants
information (count: 67 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:67)

rs_ID	r²[population]
rs10444489	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10444491	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10444492	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1064951	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10744763	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10744764	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10774594	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10774595	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10774596	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10774597	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10774598	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10849873	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10849875	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10849877	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10849878	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10849879	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10849880	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10849882	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10849884	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10849885	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10849887	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10849889	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10849891	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11065549	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11065551	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11065563	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11065565	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11065575	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11065576	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11065577	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11065578	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11065579	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11065582	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11065583	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11065585	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11838335	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12427382	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12578785	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12581843	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12581861	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2288154	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3751131	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3817543	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3817544	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3817545	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3817546	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3817547	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3817549	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3817551	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4081775	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57185007	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs57889600	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57971979	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58609847	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs58849369	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59103597	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59190874	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61953461	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs61953462	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61953497	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61955092	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61955131	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61955138	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9300314	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs951498	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9634167	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9634168	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121850400-121887400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr12:121851800-121891400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr12:121852200-121883200	Strong transcription	HUES64 Cell Line	embryonic stem cell
4	chr12:121852200-121884800	Strong transcription	Primary T cells from cord blood	blood
5	chr12:121852400-121881800	Strong transcription	Duodenum Mucosa	Duodenum
6	chr12:121852600-121881600	Strong transcription	H1 Cell Line	embryonic stem cell
7	chr12:121853000-121884800	Strong transcription	HUES48 Cell Line	embryonic stem cell
8	chr12:121853800-121880800	Strong transcription	Ovary	ovary
9	chr12:121853800-121880800	Strong transcription	Rectal Mucosa Donor 29	rectum
10	chr12:121853800-121881000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
11	chr12:121853800-121881000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr12:121854000-121880600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr12:121854000-121881400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr12:121854200-121881000	Strong transcription	Primary T cells fromperipheralblood	blood
15	chr12:121858600-121876800	Weak transcription	Pancreatic Islets	Pancreatic Islet
16	chr12:121861400-121903600	Weak transcription	Right Atrium	heart
17	chr12:121861600-121877400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr12:121861600-121881000	Strong transcription	Fetal Muscle Trunk	muscle
19	chr12:121863600-121880000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr12:121864000-121889200	Strong transcription	Fetal Intestine Small	intestine
21	chr12:121864200-121883600	Strong transcription	Spleen	Spleen
22	chr12:121864600-121887200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
23	chr12:121865000-121884000	Strong transcription	Primary B cells from peripheral blood	blood
24	chr12:121865400-121875000	Strong transcription	Placenta Amnion	Placenta Amnion
25	chr12:121865800-121875200	Strong transcription	Fetal Intestine Large	intestine
26	chr12:121867600-121890000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
27	chr12:121868000-121893600	Weak transcription	Psoas Muscle	Psoas
28	chr12:121868200-121881200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
29	chr12:121868600-121880000	Strong transcription	Stomach Smooth Muscle	stomach
30	chr12:121868800-121877800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
31	chr12:121869000-121876400	Weak transcription	Colonic Mucosa	Colon
32	chr12:121869600-121876400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
33	chr12:121869600-121878800	Weak transcription	Small Intestine	intestine
34	chr12:121869600-121886400	Weak transcription	Fetal Heart	heart
35	chr12:121870000-121879200	Strong transcription	HSMMtube	muscle
36	chr12:121870800-121876200	Weak transcription	Brain Angular Gyrus	brain
37	chr12:121870800-121876200	Weak transcription	Brain Substantia Nigra	brain
38	chr12:121871000-121876200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr12:121871200-121876200	Weak transcription	Gastric	stomach
40	chr12:121871400-121876800	Weak transcription	Right Ventricle	heart
41	chr12:121871400-121879800	Weak transcription	Stomach Mucosa	stomach
42	chr12:121872000-121876200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
43	chr12:121872600-121883400	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr12:121872800-121875200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr12:121873000-121875000	Strong transcription	Left Ventricle	heart
46	chr12:121873000-121875200	Strong transcription	Brain Cingulate Gyrus	brain
47	chr12:121873000-121879200	Strong transcription	Hela-S3	cervix
48	chr12:121873000-121880000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr12:121873000-121880600	Strong transcription	Fetal Lung	lung
50	chr12:121873000-121880800	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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