Variant report

Variant rs61959576
Chromosome Location chr13:53192652-53192653
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:53190800-53192800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr13:53191000-53192800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr13:53191000-53192800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr13:53191000-53192800 Active TSS HUES6 Cell Line embryonic stem cell
5 chr13:53191000-53192800 Active TSS iPS-18 Cell Line embryonic stem cell
6 chr13:53191000-53193000 Active TSS iPS-20b Cell Line embryonic stem cell
7 chr13:53191000-53193000 Active TSS Pancreatic Islets Pancreatic Islet
8 chr13:53191200-53192800 Active TSS HUES48 Cell Line embryonic stem cell
9 chr13:53191400-53192800 Active TSS Fetal Thymus thymus
10 chr13:53191600-53192800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
11 chr13:53191800-53192800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr13:53191800-53193000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr13:53192000-53193000 Flanking Active TSS Primary T cells from cord blood blood
14 chr13:53192000-53193000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr13:53192000-53224800 Weak transcription Small Intestine intestine
16 chr13:53192000-53225000 Weak transcription Spleen Spleen
17 chr13:53192200-53192800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr13:53192200-53192800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr13:53192200-53192800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
20 chr13:53192200-53192800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
21 chr13:53192200-53192800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr13:53192200-53192800 Flanking Active TSS NH-A brain
23 chr13:53192200-53193000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
24 chr13:53192200-53193000 Flanking Active TSS Dnd41 blood
25 chr13:53192200-53202200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr13:53192200-53202200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr13:53192200-53214000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr13:53192200-53224200 Weak transcription Esophagus oesophagus
29 chr13:53192200-53224800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr13:53192200-53224800 Weak transcription Gastric stomach
31 chr13:53192200-53224800 Weak transcription Pancreas Pancrea
32 chr13:53192200-53224800 Weak transcription Placenta Amnion Placenta Amnion
33 chr13:53192400-53192800 Enhancers Primary B cells from peripheral blood blood
34 chr13:53192400-53192800 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr13:53192400-53192800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
36 chr13:53192400-53192800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr13:53192400-53192800 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr13:53192400-53192800 Enhancers Fetal Heart heart
39 chr13:53192400-53192800 Enhancers Fetal Kidney kidney
40 chr13:53192400-53192800 Enhancers Fetal Stomach stomach
41 chr13:53192400-53192800 Active TSS Stomach Smooth Muscle stomach
42 chr13:53192400-53192800 Flanking Active TSS GM12878-XiMat blood
43 chr13:53192400-53193000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr13:53192400-53193000 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr13:53192400-53193000 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr13:53192400-53193000 Enhancers Liver Liver
47 chr13:53192400-53193000 Enhancers Colon Smooth Muscle Colon
48 chr13:53192400-53193200 Enhancers Primary T helper cells fromperipheralblood blood
49 chr13:53192400-53193200 Weak transcription Fetal Muscle Trunk muscle
50 chr13:53192400-53193400 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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