Variant report

Variant rs1436728
Chromosome Location chr13:53228460-53228461
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:53224400-53228600 Active TSS H1 Cell Line embryonic stem cell
2 chr13:53224600-53228600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
3 chr13:53224600-53229200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr13:53225000-53228600 Active TSS HUES48 Cell Line embryonic stem cell
5 chr13:53225000-53228600 Active TSS iPS-20b Cell Line embryonic stem cell
6 chr13:53225000-53229000 Active TSS K562 blood
7 chr13:53225000-53229400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
8 chr13:53225200-53228600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr13:53225200-53228600 Active TSS Hela-S3 cervix
10 chr13:53225400-53228800 Active TSS HUES6 Cell Line embryonic stem cell
11 chr13:53225400-53228800 Active TSS iPS-18 Cell Line embryonic stem cell
12 chr13:53225400-53229600 Active TSS NHLF lung
13 chr13:53225600-53228600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr13:53225600-53228600 Active TSS Brain Germinal Matrix brain
15 chr13:53225600-53228800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
16 chr13:53225800-53228800 Active TSS Ovary ovary
17 chr13:53227200-53228600 Flanking Active TSS Primary hematopoietic stem cells blood
18 chr13:53227400-53228800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr13:53227600-53228600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr13:53227600-53229200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
21 chr13:53227600-53235000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr13:53227800-53228800 Flanking Active TSS Adipose Nuclei Adipose
23 chr13:53227800-53228800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
24 chr13:53227800-53228800 Enhancers Small Intestine intestine
25 chr13:53227800-53228800 Flanking Active TSS HUVEC blood vessel
26 chr13:53227800-53229000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr13:53227800-53229200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr13:53227800-53229600 Weak transcription Gastric stomach
29 chr13:53227800-53238600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr13:53227800-53238800 Weak transcription Esophagus oesophagus
31 chr13:53227800-53260000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr13:53228000-53228600 Enhancers Placenta Amnion Placenta Amnion
33 chr13:53228000-53228800 Enhancers Primary monocytes fromperipheralblood blood
34 chr13:53228000-53228800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
35 chr13:53228000-53228800 Flanking Active TSS Brain Anterior Caudate brain
36 chr13:53228000-53228800 Flanking Active TSS Duodenum Mucosa Duodenum
37 chr13:53228000-53228800 Flanking Active TSS Fetal Brain Male brain
38 chr13:53228000-53228800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
39 chr13:53228000-53228800 Enhancers Stomach Mucosa stomach
40 chr13:53228000-53229000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
41 chr13:53228000-53229000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr13:53228000-53229200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr13:53228000-53229800 Enhancers Spleen Spleen
44 chr13:53228000-53251000 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr13:53228200-53228600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
46 chr13:53228200-53228600 Flanking Active TSS Pancreatic Islets Pancreatic Islet
47 chr13:53228200-53228600 Enhancers Skeletal Muscle Female skeletal muscle
48 chr13:53228200-53228600 Flanking Active TSS HSMM muscle
49 chr13:53228200-53228800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr13:53228200-53228800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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