The 2.0 version of rSNPBase

Variant report

Variant rs62237806
Chromosome Location chr22:31986300-31986301
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31935800-32013200 Weak transcription iPS-18 Cell Line embryonic stem cell
2 chr22:31947800-32009600 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr22:31949400-32014400 Weak transcription Hela-S3 cervix
4 chr22:31957400-32016400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr22:31964600-31993600 Weak transcription Psoas Muscle Psoas
6 chr22:31968800-32003800 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr22:31974400-31998200 Weak transcription Small Intestine intestine
8 chr22:31974800-31998200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr22:31975000-32003800 Weak transcription Aorta Aorta
10 chr22:31976200-32014800 Weak transcription A549 lung
11 chr22:31976400-32014800 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr22:31976400-32019200 Weak transcription Fetal Brain Male brain
13 chr22:31978200-31987200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr22:31979600-31986400 Strong transcription Primary B cells from peripheral blood blood
15 chr22:31981200-31986400 Weak transcription Fetal Heart heart
16 chr22:31981800-31995600 Weak transcription HUVEC blood vessel
17 chr22:31982000-31989800 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr22:31982000-31998000 Weak transcription Brain Angular Gyrus brain
19 chr22:31982400-31998200 Weak transcription Gastric stomach
20 chr22:31982600-31997400 Weak transcription Brain Hippocampus Middle brain
21 chr22:31982600-31998000 Weak transcription NHEK skin
22 chr22:31982600-31998400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr22:31982600-32006400 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr22:31982800-31986400 Strong transcription Primary T cells fromperipheralblood blood
25 chr22:31982800-31987000 Weak transcription HSMMtube muscle
26 chr22:31982800-31997600 Weak transcription Colon Smooth Muscle Colon
27 chr22:31982800-31998200 Weak transcription NHLF lung
28 chr22:31983000-31990200 Weak transcription HMEC breast
29 chr22:31983000-31991400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr22:31983000-31998600 Weak transcription Colonic Mucosa Colon
31 chr22:31983600-31987200 Weak transcription NH-A brain
32 chr22:31983600-31998000 Weak transcription Spleen Spleen
33 chr22:31983800-31996400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr22:31984400-31987800 Weak transcription NHDF-Ad bronchial
35 chr22:31984400-31990000 Weak transcription Placenta Placenta
36 chr22:31984400-31990000 Weak transcription HSMM muscle
37 chr22:31984400-31990200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr22:31984400-31991400 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr22:31984400-31991400 Weak transcription K562 blood
40 chr22:31984400-31992200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr22:31984400-31996400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr22:31984400-31996800 Weak transcription GM12878-XiMat blood
43 chr22:31984400-31998000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr22:31984400-31998000 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr22:31984400-31998200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr22:31984400-31998400 Weak transcription Primary B cells from cord blood blood
47 chr22:31984400-31998400 Weak transcription Adipose Nuclei Adipose
48 chr22:31984400-31998400 Weak transcription Fetal Lung lung
49 chr22:31984400-31999000 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr22:31984600-31996200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015