The 2.0 version of rSNPBase

Variant report

Variant rs62237848
Chromosome Location chr22:32029658-32029659
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32027200-32042400 Weak transcription A549 lung
2 chr22:32027200-32042600 Weak transcription Thymus Thymus
3 chr22:32027200-32043400 Weak transcription Aorta Aorta
4 chr22:32027400-32029800 Weak transcription Liver Liver
5 chr22:32027400-32029800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr22:32027400-32030000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr22:32027400-32033600 Weak transcription Fetal Kidney kidney
8 chr22:32027400-32034000 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr22:32027400-32034000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr22:32027400-32042200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr22:32027400-32042800 Weak transcription Fetal Lung lung
12 chr22:32027600-32029800 Weak transcription Hela-S3 cervix
13 chr22:32027600-32030000 Genic enhancers Fetal Intestine Small intestine
14 chr22:32027600-32030000 Weak transcription Stomach Mucosa stomach
15 chr22:32027600-32030200 Weak transcription HMEC breast
16 chr22:32027600-32031600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr22:32027600-32031800 Weak transcription Psoas Muscle Psoas
18 chr22:32027600-32033400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr22:32027600-32033400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr22:32027600-32033400 Weak transcription Gastric stomach
21 chr22:32027600-32033400 Weak transcription Right Atrium heart
22 chr22:32027600-32033600 Weak transcription Brain Anterior Caudate brain
23 chr22:32027600-32033600 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr22:32027600-32035600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr22:32027600-32035800 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr22:32027600-32037000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr22:32027600-32040600 Weak transcription Ovary ovary
28 chr22:32027600-32042000 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr22:32027600-32042000 Weak transcription NH-A brain
30 chr22:32027600-32042200 Weak transcription Brain Germinal Matrix brain
31 chr22:32027600-32043200 Weak transcription HSMMtube muscle
32 chr22:32027600-32044800 Weak transcription Small Intestine intestine
33 chr22:32027800-32029800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr22:32027800-32029800 Enhancers GM12878-XiMat blood
35 chr22:32027800-32029800 Weak transcription HepG2 liver
36 chr22:32027800-32030000 Genic enhancers Primary neutrophils fromperipheralblood blood
37 chr22:32027800-32030000 Weak transcription Fetal Thymus thymus
38 chr22:32027800-32030200 Weak transcription Esophagus oesophagus
39 chr22:32027800-32031600 Weak transcription Pancreas Pancrea
40 chr22:32027800-32032000 Weak transcription H1 Cell Line embryonic stem cell
41 chr22:32027800-32032000 Weak transcription Fetal Intestine Large intestine
42 chr22:32027800-32033200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr22:32027800-32033400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr22:32027800-32033400 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr22:32027800-32033400 Weak transcription Duodenum Mucosa Duodenum
46 chr22:32027800-32033400 Weak transcription NHLF lung
47 chr22:32027800-32033400 Weak transcription Osteobl bone
48 chr22:32027800-32033600 Weak transcription Muscle Satellite Cultured Cells --
49 chr22:32027800-32033600 Weak transcription Brain Cingulate Gyrus brain
50 chr22:32027800-32033600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015