The 2.0 version of rSNPBase

Variant report

Variant rs62237838
Chromosome Location chr22:32021596-32021597
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31998600-32022000 Weak transcription Fetal Kidney kidney
2 chr22:32003600-32022000 Strong transcription Dnd41 blood
3 chr22:32008000-32022600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr22:32009600-32021800 Strong transcription Primary T cells from cord blood blood
5 chr22:32010200-32025600 Genic enhancers Placenta Placenta
6 chr22:32012200-32022600 Strong transcription Thymus Thymus
7 chr22:32012600-32022000 Weak transcription Psoas Muscle Psoas
8 chr22:32012600-32024400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr22:32013000-32022200 Strong transcription Muscle Satellite Cultured Cells --
10 chr22:32013200-32022000 Strong transcription Sigmoid Colon Sigmoid Colon
11 chr22:32013200-32024000 Strong transcription Primary neutrophils fromperipheralblood blood
12 chr22:32013600-32025200 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr22:32014000-32025600 Strong transcription Primary monocytes fromperipheralblood blood
14 chr22:32015000-32022000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr22:32015200-32021800 Strong transcription Duodenum Mucosa Duodenum
16 chr22:32015200-32022000 Weak transcription Fetal Lung lung
17 chr22:32015400-32022400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr22:32015400-32025200 Weak transcription Hela-S3 cervix
19 chr22:32016000-32023600 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr22:32016400-32025400 Weak transcription HSMM muscle
21 chr22:32016600-32021600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr22:32016600-32022400 Weak transcription A549 lung
23 chr22:32016600-32025600 Weak transcription Small Intestine intestine
24 chr22:32016800-32025600 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr22:32017000-32025400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr22:32017400-32021600 Genic enhancers Fetal Muscle Trunk muscle
27 chr22:32017600-32022000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr22:32017600-32025600 Genic enhancers Spleen Spleen
29 chr22:32017800-32021600 Weak transcription Colonic Mucosa Colon
30 chr22:32017800-32022600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr22:32017800-32022800 Weak transcription Primary B cells from cord blood blood
32 chr22:32017800-32022800 Weak transcription Primary hematopoietic stem cells blood
33 chr22:32018000-32022400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr22:32018000-32022400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
35 chr22:32018000-32025400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr22:32018000-32025600 Weak transcription Aorta Aorta
37 chr22:32018200-32022000 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr22:32018200-32025600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr22:32018200-32025600 Weak transcription HSMMtube muscle
40 chr22:32018400-32021800 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr22:32018400-32021800 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr22:32018400-32022000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr22:32018400-32022000 Weak transcription NHDF-Ad bronchial
44 chr22:32018400-32023400 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr22:32018400-32025200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr22:32018600-32025000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr22:32018800-32024600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr22:32019000-32023000 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr22:32019200-32023200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr22:32019200-32025000 Weak transcription Osteobl bone

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Last update: Aug 31, 2015