Variant report
| Variant | rs130089 |
|---|---|
| Chromosome Location | chr22:31963557-31963558 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:31893400-31971200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 2 | chr22:31893600-31970000 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr22:31927400-31970000 | Weak transcription | NH-A | brain |
| 4 | chr22:31927400-31970200 | Weak transcription | Fetal Lung | lung |
| 5 | chr22:31927400-31979400 | Weak transcription | NHDF-Ad | bronchial |
| 6 | chr22:31927400-31980000 | Weak transcription | HSMMtube | muscle |
| 7 | chr22:31927600-31974200 | Weak transcription | Small Intestine | intestine |
| 8 | chr22:31929800-31985600 | Weak transcription | Fetal Kidney | kidney |
| 9 | chr22:31933200-31971000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 10 | chr22:31933600-31979600 | Weak transcription | HUVEC | blood vessel |
| 11 | chr22:31934000-31981000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 12 | chr22:31935200-31985400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr22:31935600-31970000 | Weak transcription | HMEC | breast |
| 14 | chr22:31935800-32013200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 15 | chr22:31941400-31981400 | Weak transcription | NHEK | skin |
| 16 | chr22:31947000-31970200 | Weak transcription | Brain Substantia Nigra | brain |
| 17 | chr22:31947000-31970200 | Weak transcription | Fetal Muscle Leg | muscle |
| 18 | chr22:31947200-31969600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 19 | chr22:31947400-31968200 | Weak transcription | Brain Germinal Matrix | brain |
| 20 | chr22:31947400-31968800 | Weak transcription | Gastric | stomach |
| 21 | chr22:31947400-31968800 | Weak transcription | Pancreas | Pancrea |
| 22 | chr22:31947400-31969000 | Weak transcription | Fetal Brain Female | brain |
| 23 | chr22:31947400-31969000 | Weak transcription | Lung | lung |
| 24 | chr22:31947400-31969200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 25 | chr22:31947400-31970200 | Weak transcription | Ovary | ovary |
| 26 | chr22:31947400-31971000 | Weak transcription | Aorta | Aorta |
| 27 | chr22:31947400-31972800 | Weak transcription | Esophagus | oesophagus |
| 28 | chr22:31947800-31968800 | Weak transcription | Spleen | Spleen |
| 29 | chr22:31947800-31969000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 30 | chr22:31947800-31969200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 31 | chr22:31947800-31970200 | Weak transcription | Fetal Intestine Large | intestine |
| 32 | chr22:31947800-31970200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 33 | chr22:31947800-31971000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 34 | chr22:31947800-31971200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 35 | chr22:31947800-32009600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 36 | chr22:31948000-31968400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 37 | chr22:31948000-31973400 | Weak transcription | Liver | Liver |
| 38 | chr22:31948200-31968800 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 39 | chr22:31948200-31980000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 40 | chr22:31949200-31971800 | Weak transcription | NHLF | lung |
| 41 | chr22:31949200-31973400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 42 | chr22:31949200-31981600 | Weak transcription | Left Ventricle | heart |
| 43 | chr22:31949400-32014400 | Weak transcription | Hela-S3 | cervix |
| 44 | chr22:31949600-31977800 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 45 | chr22:31949800-31976400 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 46 | chr22:31950800-31963800 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 47 | chr22:31952800-31967400 | Strong transcription | Fetal Thymus | thymus |
| 48 | chr22:31954000-31965400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 49 | chr22:31954000-31968800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 50 | chr22:31954000-31968800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
