The 2.0 version of rSNPBase

Variant report

Variant rs62237818
Chromosome Location chr22:31995953-31995954
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31935800-32013200 Weak transcription iPS-18 Cell Line embryonic stem cell
2 chr22:31947800-32009600 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr22:31949400-32014400 Weak transcription Hela-S3 cervix
4 chr22:31957400-32016400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr22:31968800-32003800 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr22:31974400-31998200 Weak transcription Small Intestine intestine
7 chr22:31974800-31998200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr22:31975000-32003800 Weak transcription Aorta Aorta
9 chr22:31976200-32014800 Weak transcription A549 lung
10 chr22:31976400-32014800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr22:31976400-32019200 Weak transcription Fetal Brain Male brain
12 chr22:31982000-31998000 Weak transcription Brain Angular Gyrus brain
13 chr22:31982400-31998200 Weak transcription Gastric stomach
14 chr22:31982600-31997400 Weak transcription Brain Hippocampus Middle brain
15 chr22:31982600-31998000 Weak transcription NHEK skin
16 chr22:31982600-31998400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr22:31982600-32006400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr22:31982800-31997600 Weak transcription Colon Smooth Muscle Colon
19 chr22:31982800-31998200 Weak transcription NHLF lung
20 chr22:31983000-31998600 Weak transcription Colonic Mucosa Colon
21 chr22:31983600-31998000 Weak transcription Spleen Spleen
22 chr22:31983800-31996400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr22:31984400-31996400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr22:31984400-31996800 Weak transcription GM12878-XiMat blood
25 chr22:31984400-31998000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr22:31984400-31998000 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr22:31984400-31998200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr22:31984400-31998400 Weak transcription Primary B cells from cord blood blood
29 chr22:31984400-31998400 Weak transcription Adipose Nuclei Adipose
30 chr22:31984400-31998400 Weak transcription Fetal Lung lung
31 chr22:31984400-31999000 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr22:31984600-31996200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr22:31984600-31997600 Weak transcription Fetal Muscle Leg muscle
34 chr22:31984600-31997800 Weak transcription Stomach Smooth Muscle stomach
35 chr22:31984600-31998000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr22:31984600-31998200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr22:31984600-31998200 Weak transcription Ovary ovary
38 chr22:31985200-31998200 Weak transcription Fetal Brain Female brain
39 chr22:31985600-31997800 Weak transcription Primary monocytes fromperipheralblood blood
40 chr22:31985600-31998000 Weak transcription Osteobl bone
41 chr22:31985600-31998400 Weak transcription Brain Anterior Caudate brain
42 chr22:31985600-32014000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr22:31985800-31996000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr22:31985800-31996000 Weak transcription Muscle Satellite Cultured Cells --
45 chr22:31985800-31996400 Weak transcription Dnd41 blood
46 chr22:31985800-31996600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr22:31985800-31996600 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr22:31985800-31996600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr22:31985800-31996800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr22:31985800-31997600 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015