Variant report

Variant	rs6471788
Chromosome Location	chr8:49375958-49375959
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10089933	0.85[AFR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10091807	0.80[AFR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10096760	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10096946	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10104817	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10107213	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10108258	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10282826	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10282853	0.84[EUR][1000 genomes]
rs10957084	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11989167	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11990598	0.85[AFR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12386841	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13263338	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13265552	0.89[EUR][1000 genomes]
rs13281995	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1510931	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16936986	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1910251	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35023025	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6471766	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs68052435	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6980967	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6983687	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6984699	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6988484	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6990833	0.83[JPT][hapmap]
rs6993458	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7012665	0.82[EUR][1000 genomes]
rs7013462	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7014106	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7017438	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7816649	0.84[EUR][1000 genomes]
rs7818323	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7827432	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7830050	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7838570	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs871920	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9298007	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs937651	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs949635	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs955819	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9693067	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs9987211	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49375600-49376000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:49375600-49376000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell

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