Variant report

Variant rs6534005
Chromosome Location chr4:79738598-79738599
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79714400-79748400 Weak transcription Aorta Aorta
2 chr4:79720800-79747800 Weak transcription Osteobl bone
3 chr4:79721200-79741400 Weak transcription Thymus Thymus
4 chr4:79721600-79747200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr4:79726600-79747800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr4:79727800-79748200 Weak transcription NHEK skin
7 chr4:79728400-79747200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr4:79728600-79747200 Weak transcription Primary monocytes fromperipheralblood blood
9 chr4:79729000-79747200 Weak transcription Fetal Muscle Trunk muscle
10 chr4:79730400-79741400 Weak transcription Primary T cells from cord blood blood
11 chr4:79731400-79748600 Weak transcription Pancreas Pancrea
12 chr4:79731600-79747400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr4:79731600-79748000 Weak transcription Fetal Muscle Leg muscle
14 chr4:79731800-79747200 Weak transcription Left Ventricle heart
15 chr4:79731800-79747400 Weak transcription Liver Liver
16 chr4:79732200-79747000 Weak transcription NHLF lung
17 chr4:79732400-79739600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr4:79732400-79747200 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr4:79732400-79747800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr4:79732400-79759200 Weak transcription Rectal Smooth Muscle rectum
21 chr4:79733000-79745000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr4:79733400-79747400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr4:79734200-79739800 Weak transcription Fetal Intestine Small intestine
24 chr4:79735400-79746800 Weak transcription NHDF-Ad bronchial
25 chr4:79735600-79740800 Strong transcription Primary B cells from cord blood blood
26 chr4:79735600-79741800 Weak transcription Fetal Thymus thymus
27 chr4:79735800-79739800 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr4:79735800-79746400 Weak transcription Primary B cells from peripheral blood blood
29 chr4:79735800-79746600 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr4:79735800-79747200 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr4:79736400-79746800 Weak transcription Primary hematopoietic stem cells blood
32 chr4:79736400-79746800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr4:79736400-79748600 Weak transcription HSMM muscle
34 chr4:79736600-79748600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr4:79737400-79747400 Weak transcription Lung lung
36 chr4:79738000-79739000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr4:79738000-79746600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr4:79738200-79738800 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr4:79738200-79739000 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr4:79738200-79739000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr4:79738200-79739000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr4:79738200-79739200 Enhancers HUES48 Cell Line embryonic stem cell
43 chr4:79738200-79748000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr4:79738400-79738600 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr4:79738400-79738800 Enhancers H9 Cell Line embryonic stem cell
46 chr4:79738400-79738800 Enhancers HUES64 Cell Line embryonic stem cell
47 chr4:79738400-79738800 Genic enhancers Fetal Intestine Large intestine
48 chr4:79738400-79738800 Genic enhancers K562 blood
49 chr4:79738400-79739000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr4:79738400-79739000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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