Variant report

Variant	rs1426139
Chromosome Location	chr4:79766677-79766678
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:79761242..79763220-chr4:79764884..79767301,3	K562	blood:

Extended variants
information (count: 187 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:182)

rs_ID	r²[population]
rs10005471	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10010709	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10027127	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10213354	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10518201	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs10518202	0.89[ASN][1000 genomes]
rs10518205	0.94[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10518206	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10518208	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10518209	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11728572	0.82[JPT][hapmap]
rs12641797	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12643807	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12644278	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs12644502	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12644685	1.00[CEU][hapmap];0.94[CHB][hapmap];0.92[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12645310	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12647482	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12647524	1.00[CEU][hapmap];0.93[CHB][hapmap];0.93[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12647653	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12648219	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs12648396	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs12648450	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12649750	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12649863	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12649978	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12650337	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1426137	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1564458	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16997408	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17003427	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap]
rs17003443	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs17003450	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17003451	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[YRI][hapmap];0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17003453	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17003454	1.00[CEU][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17003464	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17003465	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17003472	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17003478	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17003479	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17003488	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17003489	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17003492	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17003499	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17003500	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17003503	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17003504	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17003511	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17008951	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1834517	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1972691	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.91[ASN][1000 genomes]
rs1978552	0.85[ASN][1000 genomes]
rs2033060	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2033061	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2033062	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2033063	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2114203	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2127781	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2162228	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2170243	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2288255	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2291181	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs2306443	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28372745	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28410307	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28411173	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28489278	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28499303	0.84[ASN][1000 genomes]
rs28515480	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28579738	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28587143	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28621590	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2867496	1.00[CEU][hapmap]
rs28719734	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2903591	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35741786	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3775513	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3775514	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3775515	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3775516	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3775518	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3775519	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.91[ASN][1000 genomes]
rs3775522	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3775525	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3796681	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3796682	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3811766	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3822107	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3822108	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs41418051	0.91[ASN][1000 genomes]
rs41509244	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4432766	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs4550959	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4637427	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs56802690	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57011679	0.85[ASN][1000 genomes]
rs57429247	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57574345	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57707267	0.85[ASN][1000 genomes]
rs57767544	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58634945	0.84[ASN][1000 genomes]
rs58761040	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59030520	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59707131	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59994556	0.84[ASN][1000 genomes]
rs60830908	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60981779	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61073409	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61193392	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61470194	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61671866	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62307961	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62307962	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62307963	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62307964	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62307966	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62307967	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62307968	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62307994	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62307995	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62307996	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62308000	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62308001	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62308002	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62308004	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62308006	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62308007	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62308008	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62308009	0.95[ASN][1000 genomes]
rs62308010	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62308011	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62308012	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62308013	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62308042	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62308350	0.84[ASN][1000 genomes]
rs62308353	0.85[ASN][1000 genomes]
rs62308358	0.85[ASN][1000 genomes]
rs62310760	0.84[ASN][1000 genomes]
rs62310763	0.91[ASN][1000 genomes]
rs62310789	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62310790	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62310793	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62310795	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62310796	0.90[ASN][1000 genomes]
rs62310800	0.91[ASN][1000 genomes]
rs62310803	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62310804	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62310806	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62310809	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62310810	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62310811	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62310843	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6534005	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6814884	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6828501	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6830661	1.00[CEU][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6838118	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6839280	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs6843114	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6844426	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6845695	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6850116	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6854774	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6857012	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6857679	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs727760	0.85[ASN][1000 genomes]
rs727761	0.85[ASN][1000 genomes]
rs7439893	0.85[ASN][1000 genomes]
rs7662194	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7671578	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7674715	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7681040	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7681426	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7682144	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7691065	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7691825	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7692418	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7692450	0.87[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7694563	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7696247	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9992277	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1792021	chr4:79661618-79784245	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1011365	chr4:79714695-79779723	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region miRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1007685	chr4:79732468-79788768	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
4	nsv879504	chr4:79759796-79874275	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
5	nsv508291	chr4:79761211-79772916	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:99 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:79738800-79793200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr4:79744600-79793800	Weak transcription	Psoas Muscle	Psoas
3	chr4:79745800-79786400	Weak transcription	Primary T helper cells PMA-I stimulated	--
4	chr4:79746800-79783400	Weak transcription	A549	lung
5	chr4:79747200-79815600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr4:79748800-79823600	Weak transcription	Small Intestine	intestine
7	chr4:79749200-79773800	Weak transcription	Esophagus	oesophagus
8	chr4:79749200-79793600	Weak transcription	Brain Cingulate Gyrus	brain
9	chr4:79749400-79780000	Weak transcription	HUVEC	blood vessel
10	chr4:79749400-79782000	Weak transcription	HepG2	liver
11	chr4:79749400-79792400	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr4:79749400-79793800	Weak transcription	Gastric	stomach
13	chr4:79749600-79781000	Weak transcription	Ovary	ovary
14	chr4:79749600-79784600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr4:79749600-79793000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr4:79749600-79793600	Weak transcription	Brain Germinal Matrix	brain
17	chr4:79749600-79793800	Weak transcription	Fetal Brain Female	brain
18	chr4:79749800-79772200	Weak transcription	Primary T helper cells fromperipheralblood	blood
19	chr4:79749800-79773600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr4:79749800-79781400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
21	chr4:79749800-79786800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
22	chr4:79749800-79788000	Weak transcription	Lung	lung
23	chr4:79749800-79793400	Weak transcription	Thymus	Thymus
24	chr4:79749800-79793600	Weak transcription	Colonic Mucosa	Colon
25	chr4:79750000-79766800	Weak transcription	Brain Substantia Nigra	brain
26	chr4:79750200-79772200	Weak transcription	Placenta	Placenta
27	chr4:79750200-79786600	Weak transcription	Left Ventricle	heart
28	chr4:79750200-79787600	Weak transcription	Primary T cells fromperipheralblood	blood
29	chr4:79750400-79772600	Weak transcription	Dnd41	blood
30	chr4:79750400-79777800	Weak transcription	Skeletal Muscle Female	skeletal muscle
31	chr4:79750400-79783400	Weak transcription	NHEK	skin
32	chr4:79750400-79786800	Weak transcription	NH-A	brain
33	chr4:79750400-79791400	Weak transcription	Colon Smooth Muscle	Colon
34	chr4:79750400-79792200	Weak transcription	HUES48 Cell Line	embryonic stem cell
35	chr4:79750400-79792600	Weak transcription	Placenta Amnion	Placenta Amnion
36	chr4:79750400-79793600	Weak transcription	Stomach Smooth Muscle	stomach
37	chr4:79750400-79797000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
38	chr4:79750600-79775600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr4:79750600-79778400	Weak transcription	Fetal Heart	heart
40	chr4:79750600-79792600	Weak transcription	HSMMtube	muscle
41	chr4:79750600-79793600	Weak transcription	Fetal Kidney	kidney
42	chr4:79751600-79773400	Weak transcription	Osteobl	bone
43	chr4:79752000-79773400	Weak transcription	Brain Hippocampus Middle	brain
44	chr4:79752400-79767000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr4:79752400-79783400	Weak transcription	Sigmoid Colon	Sigmoid Colon
46	chr4:79755400-79781200	Weak transcription	HMEC	breast
47	chr4:79759400-79774600	Weak transcription	Fetal Muscle Leg	muscle
48	chr4:79759600-79772200	Weak transcription	Rectal Mucosa Donor 31	rectum
49	chr4:79759600-79773600	Weak transcription	Duodenum Mucosa	Duodenum
50	chr4:79759600-79786600	Weak transcription	Fetal Muscle Trunk	muscle

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