Variant report
Variant | rs6570734 |
---|---|
Chromosome Location | chr6:146344875-146344876 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:146342041..146345212-chr6:146346465..146351332,4 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000152822 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs6902535 | 1.00[AMR][1000 genomes] |
rs6903606 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs6904493 | 1.00[AMR][1000 genomes] |
rs6905432 | 1.00[AMR][1000 genomes] |
rs6907083 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs6918554 | 1.00[AMR][1000 genomes] |
rs6920529 | 0.96[AFR][1000 genomes];0.83[AMR][1000 genomes] |
rs6922458 | 0.95[AFR][1000 genomes] |
rs6928306 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs6930700 | 0.96[AFR][1000 genomes];0.83[AMR][1000 genomes] |
rs6936139 | 0.96[AFR][1000 genomes] |
rs6941104 | 1.00[AMR][1000 genomes] |
rs7744076 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7744542 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7745133 | 1.00[AMR][1000 genomes] |
rs7753965 | 0.83[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv604839 | chr6:146305810-146828922 | Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
No data |