Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10180972	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs10183460	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10196293	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs10497545	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12373813	0.90[CEU][hapmap];1.00[CHB][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13416735	1.00[CHB][hapmap];0.93[ASN][1000 genomes]
rs13432838	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1515288	1.00[CHB][hapmap]
rs17770666	0.94[CEU][hapmap];1.00[CHB][hapmap]
rs17771213	0.90[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17771279	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1877945	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs1996240	0.81[ASN][1000 genomes]
rs34008381	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35427104	0.81[ASN][1000 genomes]
rs4893879	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4893880	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56082800	0.86[ASN][1000 genomes]
rs6743733	0.81[ASN][1000 genomes]
rs71405993	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs932117	1.00[CHB][hapmap]
rs954649	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv961361	chr2:180530964-180534513	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180531800-180536400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:180533800-180534200	Enhancers	Fetal Intestine Small	intestine
3	chr2:180533800-180534800	Enhancers	Fetal Intestine Large	intestine

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