The 2.0 version of rSNPBase

Variant report

Variant rs6734115
Chromosome Location chr2:86123389-86123390
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86117400-86126400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr2:86118200-86126000 Weak transcription Primary T cells from cord blood blood
3 chr2:86118200-86126800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr2:86118400-86126600 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr2:86118400-86127600 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr2:86118600-86131000 Weak transcription Thymus Thymus
7 chr2:86119800-86132200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr2:86120000-86126600 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr2:86120200-86134200 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr2:86120800-86131400 Weak transcription Pancreas Pancrea
11 chr2:86121200-86123800 Weak transcription Lung lung
12 chr2:86121200-86126600 Weak transcription Primary T cells fromperipheralblood blood
13 chr2:86121400-86124000 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr2:86121400-86127000 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr2:86121400-86128800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr2:86121400-86132000 Weak transcription Placenta Placenta
17 chr2:86121600-86125800 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr2:86121600-86126800 Weak transcription Brain Angular Gyrus brain
19 chr2:86121600-86129000 Weak transcription Fetal Muscle Leg muscle
20 chr2:86121600-86129400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:86121600-86131800 Weak transcription Adipose Nuclei Adipose
22 chr2:86121800-86124000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr2:86121800-86127000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr2:86121800-86128800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:86122000-86127000 Weak transcription Brain Anterior Caudate brain
26 chr2:86122000-86134400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr2:86123000-86126800 Weak transcription Brain Cingulate Gyrus brain
28 chr2:86123200-86123400 Enhancers Brain Hippocampus Middle brain
29 chr2:86123200-86126000 Weak transcription Brain Substantia Nigra brain
30 chr2:86123200-86126400 Weak transcription Brain Inferior Temporal Lobe brain
31 chr2:86123200-86128800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:86123200-86132400 Weak transcription A549 lung
33 chr2:86123200-86132600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015