Variant report

Variant	rs6902732
Chromosome Location	chr6:143375887-143375888
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143372247..143374306-chr6:143375405..143377390,2	MCF-7	breast:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11155277	0.87[ASN][1000 genomes]
rs12664685	0.84[ASN][1000 genomes]
rs1334478	0.84[ASN][1000 genomes]
rs17590726	0.83[ASN][1000 genomes]
rs1855559	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1855560	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1889462	0.89[ASN][1000 genomes]
rs2142936	0.94[ASN][1000 genomes]
rs3761996	0.89[ASN][1000 genomes]
rs3789782	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3804526	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3804527	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3811093	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3827797	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4896614	0.97[ASN][1000 genomes]
rs4896615	0.84[ASN][1000 genomes]
rs4896617	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4896618	0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs59974378	0.81[ASN][1000 genomes]
rs6570545	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6906414	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6938207	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73777857	0.84[ASN][1000 genomes]
rs7774011	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7775419	0.83[ASN][1000 genomes]
rs9321887	0.94[ASN][1000 genomes]
rs9321888	0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9321889	0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9390046	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9399416	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9403430	0.96[ASN][1000 genomes]
rs9403432	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143356800-143377000	Weak transcription	HepG2	liver
2	chr6:143372000-143380400	Weak transcription	K562	blood
3	chr6:143373600-143380800	Weak transcription	GM12878-XiMat	blood
4	chr6:143374800-143380800	Weak transcription	Primary T cells from cord blood	blood
5	chr6:143375200-143380000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr6:143375200-143381200	Weak transcription	Aorta	Aorta
7	chr6:143375600-143379600	Weak transcription	Fetal Intestine Small	intestine
8	chr6:143375800-143376000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr6:143375800-143377200	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr6:143375800-143377200	Enhancers	HUES6 Cell Line	embryonic stem cell

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