Variant report

Variant	rs11155277
Chromosome Location	chr6:143372592-143372593
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143372247..143374306-chr6:143375405..143377390,2	MCF-7	breast:

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs12662675	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12662882	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12663937	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12664681	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12664685	0.82[EUR][1000 genomes]
rs12665439	0.80[ASN][1000 genomes]
rs1334477	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1334478	0.82[EUR][1000 genomes]
rs17590726	0.83[EUR][1000 genomes]
rs1855559	0.85[ASN][1000 genomes]
rs1855560	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1889462	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2142936	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2876540	0.96[EUR][1000 genomes]
rs2876541	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35073854	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35569003	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3761996	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3789782	0.87[ASN][1000 genomes]
rs3804526	0.87[ASN][1000 genomes]
rs3804527	0.87[ASN][1000 genomes]
rs3811093	0.86[ASN][1000 genomes]
rs3827797	0.87[ASN][1000 genomes]
rs4896614	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4896615	0.82[EUR][1000 genomes]
rs4896617	0.87[ASN][1000 genomes]
rs59463222	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs59873234	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs59974378	0.82[EUR][1000 genomes]
rs6570545	0.87[ASN][1000 genomes]
rs6902732	0.87[ASN][1000 genomes]
rs6906195	0.81[ASN][1000 genomes]
rs6906414	0.87[ASN][1000 genomes]
rs6938207	0.85[ASN][1000 genomes]
rs73777857	0.82[EUR][1000 genomes]
rs7743474	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7750571	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7774011	0.87[ASN][1000 genomes]
rs7775419	0.82[EUR][1000 genomes]
rs9321887	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9321888	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9321889	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9390046	0.86[ASN][1000 genomes]
rs9399416	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9399419	0.81[ASN][1000 genomes]
rs9403430	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9403432	0.85[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143356800-143377000	Weak transcription	HepG2	liver
2	chr6:143372000-143380400	Weak transcription	K562	blood

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