Variant report

Variant	rs9390046
Chromosome Location	chr6:143365511-143365512
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11155277	0.86[ASN][1000 genomes]
rs12664685	0.83[ASN][1000 genomes]
rs1334478	0.83[ASN][1000 genomes]
rs17590726	0.82[ASN][1000 genomes]
rs1855559	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1855560	0.99[ASN][1000 genomes]
rs1889462	0.87[ASN][1000 genomes]
rs2142936	0.93[ASN][1000 genomes]
rs3761996	0.87[ASN][1000 genomes]
rs3789782	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3804526	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3804527	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3811093	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3827797	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4896614	0.96[ASN][1000 genomes]
rs4896615	0.83[ASN][1000 genomes]
rs4896617	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4896618	0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59974378	0.80[ASN][1000 genomes]
rs6570545	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6902732	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6906414	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6938207	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73777857	0.83[ASN][1000 genomes]
rs7774011	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7775419	0.81[ASN][1000 genomes]
rs9321887	0.93[ASN][1000 genomes]
rs9321888	0.99[ASN][1000 genomes]
rs9321889	0.99[ASN][1000 genomes]
rs9399416	0.99[ASN][1000 genomes]
rs9403430	0.94[ASN][1000 genomes]
rs9403432	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143356800-143377000	Weak transcription	HepG2	liver
2	chr6:143360600-143368600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:143361400-143365600	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr6:143365400-143365600	Enhancers	Pancreas	Pancrea

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