Variant report

Variant	rs7094419
Chromosome Location	chr10:61713218-61713219
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:61665570..61668112-chr10:61711557..61714802,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000108091	Chromatin interaction

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10994077	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10994080	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10994081	0.89[ASN][1000 genomes]
rs10994082	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10994083	0.86[CHB][hapmap];0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs1171847	0.89[ASN][1000 genomes]
rs16914411	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16914415	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16914427	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16914450	0.88[CEU][hapmap]
rs2034200	0.86[CHB][hapmap];0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs3793867	0.91[EUR][1000 genomes]
rs3793870	0.91[EUR][1000 genomes]
rs3851249	0.86[CEU][hapmap];0.86[CHB][hapmap];0.94[JPT][hapmap];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs59486952	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs60411991	0.80[EUR][1000 genomes]
rs6479673	0.86[CHB][hapmap];0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs7069343	0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7073136	0.86[ASN][1000 genomes]
rs7073392	0.86[CHB][hapmap];0.84[JPT][hapmap];0.80[EUR][1000 genomes]
rs7079211	0.80[EUR][1000 genomes]
rs72811557	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72811562	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72816432	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72816440	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs7897677	0.85[ASN][1000 genomes]
rs7899008	0.92[EUR][1000 genomes]
rs7902735	0.92[EUR][1000 genomes]
rs7912514	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9888053	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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