The 2.0 version of rSNPBase

Variant report

Variant rs71395070
Chromosome Location chr15:72540412-72540413
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:72524800-72551400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr15:72525400-72548600 Weak transcription Fetal Heart heart
3 chr15:72530400-72542200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr15:72530400-72563400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr15:72530600-72542000 Weak transcription Stomach Mucosa stomach
6 chr15:72530600-72545600 Weak transcription Small Intestine intestine
7 chr15:72530800-72561200 Strong transcription Adipose Nuclei Adipose
8 chr15:72531000-72562400 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr15:72531000-72563000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr15:72531000-72563000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr15:72531000-72563400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr15:72531200-72562800 Strong transcription Fetal Muscle Leg muscle
13 chr15:72531400-72542000 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr15:72531800-72561400 Strong transcription Stomach Smooth Muscle stomach
15 chr15:72532000-72543200 Strong transcription Fetal Adrenal Gland Adrenal Gland
16 chr15:72532000-72562600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr15:72532200-72561000 Strong transcription Liver Liver
18 chr15:72532200-72561000 Strong transcription Fetal Intestine Large intestine
19 chr15:72532200-72561600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr15:72532200-72562200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr15:72532200-72563000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr15:72532400-72562600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr15:72532600-72562200 Strong transcription Brain Anterior Caudate brain
24 chr15:72532600-72562800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr15:72532800-72563000 Strong transcription HSMM muscle
26 chr15:72533000-72562000 Strong transcription Rectal Mucosa Donor 29 rectum
27 chr15:72533200-72562400 Strong transcription Hela-S3 cervix
28 chr15:72533200-72562600 Strong transcription Primary T cells fromperipheralblood blood
29 chr15:72534400-72545800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr15:72534600-72544200 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr15:72534800-72541400 Weak transcription Colonic Mucosa Colon
32 chr15:72534800-72541600 Weak transcription Gastric stomach
33 chr15:72535000-72541600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr15:72535200-72540600 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr15:72535400-72541000 Weak transcription Brain Substantia Nigra brain
36 chr15:72535400-72541600 Weak transcription Esophagus oesophagus
37 chr15:72535400-72544000 Weak transcription HUVEC blood vessel
38 chr15:72535600-72540600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr15:72535600-72540600 Weak transcription HMEC breast
40 chr15:72535600-72541200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr15:72535600-72541600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr15:72535800-72540600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr15:72535800-72541000 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr15:72535800-72541600 Weak transcription Right Ventricle heart
45 chr15:72536200-72541200 Weak transcription Spleen Spleen
46 chr15:72536200-72541400 Weak transcription H9 Cell Line embryonic stem cell
47 chr15:72536200-72541800 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr15:72536400-72540600 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr15:72536400-72540600 Weak transcription Lung lung
50 chr15:72536400-72541600 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015