The 2.0 version of rSNPBase

Variant report

Variant rs72625894
Chromosome Location chr3:23858216-23858217
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23852800-23859600 Weak transcription Gastric stomach
2 chr3:23853000-23859000 Weak transcription Placenta Placenta
3 chr3:23853000-23860000 Weak transcription Pancreas Pancrea
4 chr3:23853000-23860800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr3:23853000-23861000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr3:23853000-23861200 Weak transcription Left Ventricle heart
7 chr3:23853000-23861400 Weak transcription H9 Cell Line embryonic stem cell
8 chr3:23853000-23862400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr3:23853000-23862600 Weak transcription Ovary ovary
10 chr3:23853000-23862800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr3:23853000-23865800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr3:23853000-23866200 Weak transcription Placenta Amnion Placenta Amnion
13 chr3:23853000-23867200 Weak transcription Aorta Aorta
14 chr3:23853000-23867800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr3:23853000-23867800 Weak transcription Primary T cells fromperipheralblood blood
16 chr3:23853000-23867800 Weak transcription Esophagus oesophagus
17 chr3:23853000-23867800 Weak transcription Fetal Brain Female brain
18 chr3:23853000-23867800 Weak transcription Right Atrium heart
19 chr3:23853000-23868000 Weak transcription NH-A brain
20 chr3:23853000-23868400 Weak transcription HSMMtube muscle
21 chr3:23853000-23876000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr3:23853000-23876000 Weak transcription Fetal Stomach stomach
23 chr3:23853000-23882000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr3:23853000-23887400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr3:23853200-23858400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr3:23853200-23859400 Weak transcription Muscle Satellite Cultured Cells --
27 chr3:23853200-23861000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr3:23853200-23861000 Weak transcription Brain Germinal Matrix brain
29 chr3:23853200-23861200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr3:23853200-23861200 Weak transcription Stomach Smooth Muscle stomach
31 chr3:23853200-23893200 Weak transcription Thymus Thymus
32 chr3:23853400-23859600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr3:23853400-23864400 Weak transcription H1 Cell Line embryonic stem cell
34 chr3:23853400-23866000 Weak transcription HMEC breast
35 chr3:23853400-23867400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr3:23853400-23885600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr3:23853600-23861200 Weak transcription Primary B cells from peripheral blood blood
38 chr3:23853600-23866000 Weak transcription Liver Liver
39 chr3:23853800-23860800 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr3:23853800-23860800 Weak transcription Primary B cells from cord blood blood
41 chr3:23853800-23861000 Weak transcription Brain Anterior Caudate brain
42 chr3:23853800-23865200 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr3:23854000-23858400 Strong transcription A549 lung
44 chr3:23854000-23860200 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr3:23854000-23867400 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr3:23854200-23861200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr3:23854200-23870000 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr3:23854200-23871400 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr3:23854400-23858400 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr3:23854400-23859600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015