The 2.0 version of rSNPBase

Variant report

Variant rs72627018
Chromosome Location chr3:23885988-23885989
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23853000-23887400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:23853200-23893200 Weak transcription Thymus Thymus
3 chr3:23855000-23900200 Weak transcription HSMM muscle
4 chr3:23857600-23894000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr3:23857600-23900000 Weak transcription Fetal Muscle Trunk muscle
6 chr3:23868000-23897800 Weak transcription HUVEC blood vessel
7 chr3:23868200-23893000 Weak transcription Fetal Thymus thymus
8 chr3:23871200-23899000 Weak transcription Pancreas Pancrea
9 chr3:23871400-23897400 Weak transcription Primary T cells from cord blood blood
10 chr3:23872000-23897400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr3:23872600-23886800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr3:23873000-23887800 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr3:23873800-23893000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr3:23873800-23898000 Weak transcription NHEK skin
15 chr3:23874400-23888000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr3:23878400-23887800 Weak transcription Right Ventricle heart
18 chr3:23878400-23898000 Weak transcription Liver Liver
19 chr3:23878600-23900400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr3:23878800-23893800 Weak transcription Fetal Stomach stomach
21 chr3:23878800-23900200 Weak transcription Fetal Kidney kidney
22 chr3:23879000-23886000 Weak transcription Brain Substantia Nigra brain
23 chr3:23879000-23898000 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr3:23879000-23898200 Weak transcription Right Atrium heart
25 chr3:23879000-23907400 Weak transcription K562 blood
26 chr3:23879200-23898200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr3:23879400-23886200 Weak transcription Fetal Lung lung
28 chr3:23879400-23893000 Weak transcription Primary B cells from cord blood blood
29 chr3:23879600-23886600 Weak transcription Primary B cells from peripheral blood blood
30 chr3:23880400-23886600 Weak transcription Primary hematopoietic stem cells blood
31 chr3:23880400-23892000 Weak transcription Fetal Intestine Small intestine
32 chr3:23880600-23886200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr3:23882000-23888200 Weak transcription HMEC breast
34 chr3:23882200-23895000 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr3:23882200-23897800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr3:23882200-23905600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr3:23882400-23886000 Weak transcription Fetal Heart heart
38 chr3:23882400-23886600 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr3:23882400-23891000 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr3:23882400-23894000 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr3:23882400-23894000 Weak transcription Fetal Intestine Large intestine
42 chr3:23882400-23897800 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr3:23882400-23898000 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr3:23882600-23886000 Weak transcription Brain Germinal Matrix brain
45 chr3:23882600-23888000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:23882600-23900600 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr3:23882800-23892600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr3:23882800-23892800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr3:23882800-23898000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr3:23882800-23906000 Weak transcription HepG2 liver

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Last update: Aug 31, 2015