The 2.0 version of rSNPBase

Variant report

Variant rs72627032
Chromosome Location chr3:23900162-23900163
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23855000-23900200 Weak transcription HSMM muscle
2 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:23878600-23900400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr3:23878800-23900200 Weak transcription Fetal Kidney kidney
5 chr3:23879000-23907400 Weak transcription K562 blood
6 chr3:23882200-23905600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr3:23882600-23900600 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr3:23882800-23906000 Weak transcription HepG2 liver
9 chr3:23888200-23900600 Weak transcription Ovary ovary
10 chr3:23890600-23902800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr3:23892200-23900400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr3:23893000-23900400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr3:23893600-23900200 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr3:23893600-23900400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr3:23893600-23906400 Weak transcription Aorta Aorta
16 chr3:23893600-23906600 Weak transcription Colonic Mucosa Colon
17 chr3:23894400-23903000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr3:23894600-23900800 Weak transcription Esophagus oesophagus
19 chr3:23894600-23902400 Weak transcription Brain Germinal Matrix brain
20 chr3:23894600-23903000 Weak transcription Fetal Intestine Large intestine
21 chr3:23894800-23900600 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr3:23894800-23902800 Weak transcription Fetal Intestine Small intestine
23 chr3:23895000-23900600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr3:23895000-23903400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr3:23895400-23900600 Weak transcription HSMMtube muscle
26 chr3:23897400-23901000 Enhancers Primary monocytes fromperipheralblood blood
27 chr3:23897400-23901200 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr3:23897400-23901800 Enhancers Primary T helper cells fromperipheralblood blood
29 chr3:23897400-23902600 Enhancers Primary B cells from peripheral blood blood
30 chr3:23897400-23902600 Enhancers Thymus Thymus
31 chr3:23897600-23901800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr3:23897600-23901800 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr3:23897800-23900800 Enhancers Dnd41 blood
34 chr3:23897800-23901200 Enhancers Primary T helper cells PMA-I stimulated --
35 chr3:23897800-23901200 Enhancers Primary T killer memory cells from peripheral blood blood
36 chr3:23897800-23901600 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr3:23897800-23902000 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr3:23898000-23901800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
39 chr3:23898000-23902200 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr3:23898000-23902600 Enhancers Fetal Thymus thymus
41 chr3:23898000-23902600 Enhancers Skeletal Muscle Male skeletal muscle
42 chr3:23898000-23904800 Enhancers Skeletal Muscle Female skeletal muscle
43 chr3:23898200-23900600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr3:23898200-23901800 Enhancers Primary T cells fromperipheralblood blood
45 chr3:23898200-23901800 Enhancers Left Ventricle heart
46 chr3:23898200-23902000 Enhancers Psoas Muscle Psoas
47 chr3:23898200-23907000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr3:23898400-23900400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr3:23898400-23900600 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr3:23898400-23900600 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015