The 2.0 version of rSNPBase

Variant report

Variant rs72627085
Chromosome Location chr3:23966226-23966227
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23959600-23969400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:23960200-23967000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:23960200-23969400 Weak transcription Esophagus oesophagus
4 chr3:23961000-23966600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
5 chr3:23961800-23972800 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr3:23961800-23980200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr3:23962000-23968200 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr3:23962000-23968400 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr3:23962000-23968800 Weak transcription NHEK skin
10 chr3:23962000-23969000 Weak transcription Fetal Brain Male brain
11 chr3:23962000-23969000 Weak transcription Fetal Kidney kidney
12 chr3:23962000-23969400 Weak transcription Pancreas Pancrea
13 chr3:23962000-23969600 Weak transcription Gastric stomach
14 chr3:23962000-23970000 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr3:23962000-23972800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr3:23962000-23974800 Weak transcription Brain Substantia Nigra brain
17 chr3:23962000-23977800 Weak transcription Placenta Amnion Placenta Amnion
18 chr3:23962000-23985600 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr3:23962200-23967800 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr3:23962200-23968800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr3:23962200-23969000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr3:23962200-23970000 Weak transcription Hela-S3 cervix
23 chr3:23962400-23968800 Weak transcription HepG2 liver
24 chr3:23962400-23968800 Weak transcription NHDF-Ad bronchial
25 chr3:23962600-23967200 Weak transcription Rectal Smooth Muscle rectum
26 chr3:23962600-23970000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr3:23962800-23968800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:23963000-23968000 Weak transcription Primary B cells from cord blood blood
29 chr3:23963000-23968400 Weak transcription A549 lung
30 chr3:23963000-23968800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr3:23963000-23975200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr3:23963200-23966400 Weak transcription Dnd41 blood
33 chr3:23963200-23969200 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr3:23963200-23973200 Weak transcription GM12878-XiMat blood
35 chr3:23963200-23976000 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr3:23963600-23966400 Weak transcription Primary T cells fromperipheralblood blood
37 chr3:23963600-23967000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr3:23963600-23967800 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr3:23963600-23968200 Weak transcription Brain Angular Gyrus brain
40 chr3:23963600-23973200 Weak transcription Primary monocytes fromperipheralblood blood
41 chr3:23963800-23966800 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr3:23963800-23968000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr3:23963800-23968000 Weak transcription Left Ventricle heart
44 chr3:23963800-23968000 Weak transcription Right Ventricle heart
45 chr3:23963800-23968200 Weak transcription Brain Anterior Caudate brain
46 chr3:23963800-23968200 Weak transcription Brain Hippocampus Middle brain
47 chr3:23963800-23968400 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr3:23963800-23968800 Weak transcription Fetal Lung lung
49 chr3:23963800-23969000 Weak transcription Adipose Nuclei Adipose
50 chr3:23963800-23969400 Weak transcription Thymus Thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015