The 2.0 version of rSNPBase

Variant report

Variant rs72627086
Chromosome Location chr3:23967839-23967840
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23959600-23969400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:23960200-23969400 Weak transcription Esophagus oesophagus
3 chr3:23961800-23972800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr3:23961800-23980200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:23962000-23968200 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr3:23962000-23968400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr3:23962000-23968800 Weak transcription NHEK skin
8 chr3:23962000-23969000 Weak transcription Fetal Brain Male brain
9 chr3:23962000-23969000 Weak transcription Fetal Kidney kidney
10 chr3:23962000-23969400 Weak transcription Pancreas Pancrea
11 chr3:23962000-23969600 Weak transcription Gastric stomach
12 chr3:23962000-23970000 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr3:23962000-23972800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr3:23962000-23974800 Weak transcription Brain Substantia Nigra brain
15 chr3:23962000-23977800 Weak transcription Placenta Amnion Placenta Amnion
16 chr3:23962000-23985600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr3:23962200-23968800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr3:23962200-23969000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:23962200-23970000 Weak transcription Hela-S3 cervix
20 chr3:23962400-23968800 Weak transcription HepG2 liver
21 chr3:23962400-23968800 Weak transcription NHDF-Ad bronchial
22 chr3:23962600-23970000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:23962800-23968800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr3:23963000-23968000 Weak transcription Primary B cells from cord blood blood
25 chr3:23963000-23968400 Weak transcription A549 lung
26 chr3:23963000-23968800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr3:23963000-23975200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr3:23963200-23969200 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr3:23963200-23973200 Weak transcription GM12878-XiMat blood
30 chr3:23963200-23976000 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr3:23963600-23968200 Weak transcription Brain Angular Gyrus brain
32 chr3:23963600-23973200 Weak transcription Primary monocytes fromperipheralblood blood
33 chr3:23963800-23968000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr3:23963800-23968000 Weak transcription Left Ventricle heart
35 chr3:23963800-23968000 Weak transcription Right Ventricle heart
36 chr3:23963800-23968200 Weak transcription Brain Anterior Caudate brain
37 chr3:23963800-23968200 Weak transcription Brain Hippocampus Middle brain
38 chr3:23963800-23968400 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr3:23963800-23968800 Weak transcription Fetal Lung lung
40 chr3:23963800-23969000 Weak transcription Adipose Nuclei Adipose
41 chr3:23963800-23969400 Weak transcription Thymus Thymus
42 chr3:23963800-23970000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr3:23963800-23970600 Weak transcription Primary T cells from cord blood blood
44 chr3:23963800-23971000 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr3:23963800-23973000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr3:23963800-23978400 Weak transcription Aorta Aorta
47 chr3:23964000-23968400 Weak transcription Liver Liver
48 chr3:23964000-23968800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr3:23964000-23969800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr3:23964000-23970000 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015