The 2.0 version of rSNPBase

Variant report

Variant rs72627067
Chromosome Location chr3:23939964-23939965
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23901200-23942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr3:23907600-23940200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr3:23908000-23940200 Weak transcription Gastric stomach
4 chr3:23916000-23950200 Weak transcription Aorta Aorta
5 chr3:23916200-23948800 Weak transcription Colonic Mucosa Colon
6 chr3:23919000-23940000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr3:23919200-23940200 Weak transcription Pancreas Pancrea
8 chr3:23920800-23940200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr3:23922400-23956600 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr3:23922600-23940000 Weak transcription Colon Smooth Muscle Colon
11 chr3:23923000-23956600 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr3:23923400-23955200 Weak transcription Thymus Thymus
13 chr3:23923400-23957000 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr3:23923600-23956800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr3:23924200-23957800 Weak transcription Esophagus oesophagus
16 chr3:23924200-23957800 Weak transcription Lung lung
17 chr3:23924400-23940200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr3:23924600-23940000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr3:23924600-23940200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr3:23925000-23940200 Weak transcription Fetal Brain Female brain
21 chr3:23928000-23957200 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr3:23928800-23956000 Weak transcription Small Intestine intestine
23 chr3:23928800-23957400 Weak transcription Placenta Amnion Placenta Amnion
24 chr3:23929000-23956600 Weak transcription Rectal Smooth Muscle rectum
25 chr3:23929800-23944200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr3:23930600-23945800 Weak transcription Fetal Heart heart
27 chr3:23930800-23954800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr3:23930800-23956800 Weak transcription Brain Hippocampus Middle brain
29 chr3:23931200-23945800 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr3:23931600-23942600 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr3:23931800-23940200 Weak transcription Left Ventricle heart
32 chr3:23931800-23940200 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr3:23932000-23940200 Weak transcription H9 Cell Line embryonic stem cell
34 chr3:23932000-23955400 Weak transcription NHEK skin
35 chr3:23932200-23940200 Weak transcription H1 Cell Line embryonic stem cell
36 chr3:23933200-23940400 Weak transcription Brain Cingulate Gyrus brain
37 chr3:23934000-23944000 Weak transcription HSMMtube muscle
38 chr3:23934200-23956600 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr3:23934400-23956400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr3:23934600-23940200 Weak transcription Primary B cells from peripheral blood blood
41 chr3:23934600-23940200 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr3:23934600-23942200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:23934600-23945800 Weak transcription Hela-S3 cervix
44 chr3:23934600-23947600 Strong transcription Fetal Stomach stomach
45 chr3:23934800-23940000 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr3:23934800-23940200 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr3:23934800-23940200 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr3:23934800-23940200 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr3:23935000-23940200 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr3:23935000-23940600 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015