The 2.0 version of rSNPBase

Variant report

Variant rs72627046
Chromosome Location chr3:23914589-23914590
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23901200-23914800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr3:23901200-23915400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:23901200-23915400 Weak transcription HSMM muscle
4 chr3:23901200-23942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr3:23901400-23915200 Weak transcription NHEK skin
6 chr3:23901800-23928800 Weak transcription Primary T cells fromperipheralblood blood
7 chr3:23901800-23935600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr3:23903400-23929400 Weak transcription Dnd41 blood
9 chr3:23904000-23918200 Weak transcription Primary monocytes fromperipheralblood blood
10 chr3:23904800-23930800 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr3:23906400-23922000 Weak transcription Primary T cells from cord blood blood
12 chr3:23906600-23931800 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr3:23907000-23918400 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr3:23907000-23920400 Weak transcription Primary B cells from cord blood blood
15 chr3:23907200-23915400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr3:23907400-23915400 Weak transcription HMEC breast
17 chr3:23907600-23917600 Weak transcription Primary hematopoietic stem cells blood
18 chr3:23907600-23920000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr3:23907600-23922200 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr3:23907600-23940200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr3:23908000-23914600 Weak transcription Small Intestine intestine
22 chr3:23908000-23915000 Weak transcription Ovary ovary
23 chr3:23908000-23915400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr3:23908000-23915400 Weak transcription Aorta Aorta
25 chr3:23908000-23915400 Weak transcription NH-A brain
26 chr3:23908000-23915600 Weak transcription Esophagus oesophagus
27 chr3:23908000-23916200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr3:23908000-23918200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr3:23908000-23918400 Weak transcription Spleen Spleen
30 chr3:23908000-23918600 Weak transcription Stomach Mucosa stomach
31 chr3:23908000-23918800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr3:23908000-23922400 Weak transcription Primary B cells from peripheral blood blood
33 chr3:23908000-23923600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr3:23908000-23931600 Weak transcription Duodenum Mucosa Duodenum
35 chr3:23908000-23935600 Weak transcription Fetal Kidney kidney
36 chr3:23908000-23935600 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr3:23908000-23940200 Weak transcription Gastric stomach
38 chr3:23908200-23914800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr3:23908200-23915200 Weak transcription NHLF lung
40 chr3:23908200-23915400 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr3:23908200-23915600 Weak transcription H9 Cell Line embryonic stem cell
42 chr3:23908200-23915800 Weak transcription Brain Substantia Nigra brain
43 chr3:23908200-23916200 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr3:23908200-23919400 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr3:23908200-23930400 Weak transcription HepG2 liver
46 chr3:23908400-23915400 Weak transcription Rectal Smooth Muscle rectum
47 chr3:23908400-23915800 Weak transcription Brain Cingulate Gyrus brain
48 chr3:23908400-23916000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr3:23908600-23915800 Weak transcription Brain Anterior Caudate brain
50 chr3:23909200-23915400 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015