Variant report
| Variant | rs13321440 |
|---|---|
| Chromosome Location | chr3:23988556-23988557 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:23985600-23988800 | Active TSS | H9 Cell Line | embryonic stem cell |
| 2 | chr3:23985800-23988600 | Active TSS | Brain Anterior Caudate | brain |
| 3 | chr3:23985800-23988800 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 4 | chr3:23986000-23988600 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 5 | chr3:23986000-23988600 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 6 | chr3:23986000-23988600 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 7 | chr3:23986000-23988800 | Active TSS | Aorta | Aorta |
| 8 | chr3:23986000-23988800 | Active TSS | Ovary | ovary |
| 9 | chr3:23986200-23988600 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr3:23986200-23988600 | Active TSS | Rectal Smooth Muscle | rectum |
| 11 | chr3:23986200-23988600 | Active TSS | GM12878-XiMat | blood |
| 12 | chr3:23986200-23988800 | Active TSS | H1 Cell Line | embryonic stem cell |
| 13 | chr3:23986200-23988800 | Active TSS | ES-UCSF4 Cell Line | embryonic stem cell |
| 14 | chr3:23986200-23988800 | Active TSS | Stomach Smooth Muscle | stomach |
| 15 | chr3:23987800-23988600 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
| 16 | chr3:23987800-23988600 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 17 | chr3:23987800-23988800 | Transcr. at gene 5' and 3' | Primary T regulatory cells fromperipheralblood | blood |
| 18 | chr3:23987800-23988800 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 19 | chr3:23987800-23989000 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 20 | chr3:23987800-23989000 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 21 | chr3:23987800-23989000 | Active TSS | Right Atrium | heart |
| 22 | chr3:23987800-23989000 | Flanking Active TSS | Osteobl | bone |
| 23 | chr3:23987800-23989200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 24 | chr3:23987800-23989200 | Flanking Active TSS | NH-A | brain |
| 25 | chr3:23987800-23990000 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 26 | chr3:23987800-23991200 | Enhancers | Fetal Heart | heart |
| 27 | chr3:23988000-23988600 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 28 | chr3:23988000-23988600 | Flanking Active TSS | Primary T cells from cord blood | blood |
| 29 | chr3:23988000-23989000 | Flanking Active TSS | HMEC | breast |
| 30 | chr3:23988000-23989000 | Flanking Active TSS | HUVEC | blood vessel |
| 31 | chr3:23988000-23989000 | Flanking Active TSS | NHEK | skin |
| 32 | chr3:23988000-23989000 | Flanking Active TSS | NHLF | lung |
| 33 | chr3:23988000-23989200 | Flanking Active TSS | Adipose Nuclei | Adipose |
| 34 | chr3:23988000-23989200 | Flanking Active TSS | Brain Inferior Temporal Lobe | brain |
| 35 | chr3:23988000-23989200 | Flanking Active TSS | Hela-S3 | cervix |
| 36 | chr3:23988000-23989400 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 37 | chr3:23988000-23989400 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 38 | chr3:23988000-23989400 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 39 | chr3:23988000-23990000 | Flanking Active TSS | K562 | blood |
| 40 | chr3:23988000-23995000 | Weak transcription | Spleen | Spleen |
| 41 | chr3:23988200-23988600 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 42 | chr3:23988200-23988600 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 43 | chr3:23988200-23988800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 44 | chr3:23988200-23988800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 45 | chr3:23988200-23988800 | Flanking Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 46 | chr3:23988200-23988800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 47 | chr3:23988200-23988800 | Weak transcription | Esophagus | oesophagus |
| 48 | chr3:23988200-23988800 | Weak transcription | Pancreas | Pancrea |
| 49 | chr3:23988200-23989000 | Flanking Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 50 | chr3:23988200-23989000 | Flanking Active TSS | iPS-15b Cell Line | embryonic stem cell |
