The 2.0 version of rSNPBase

Variant report

Variant rs72627048
Chromosome Location chr3:23922891-23922892
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23901200-23942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr3:23901800-23928800 Weak transcription Primary T cells fromperipheralblood blood
3 chr3:23901800-23935600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr3:23903400-23929400 Weak transcription Dnd41 blood
5 chr3:23904800-23930800 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr3:23906600-23931800 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr3:23907600-23940200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr3:23908000-23923600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr3:23908000-23931600 Weak transcription Duodenum Mucosa Duodenum
10 chr3:23908000-23935600 Weak transcription Fetal Kidney kidney
11 chr3:23908000-23935600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr3:23908000-23940200 Weak transcription Gastric stomach
13 chr3:23908200-23930400 Weak transcription HepG2 liver
14 chr3:23912000-23923400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr3:23912200-23930200 Weak transcription Liver Liver
16 chr3:23914000-23924000 Weak transcription Fetal Intestine Large intestine
17 chr3:23915800-23923200 Weak transcription Esophagus oesophagus
18 chr3:23916000-23923400 Weak transcription Fetal Brain Female brain
19 chr3:23916000-23934000 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr3:23916000-23950200 Weak transcription Aorta Aorta
21 chr3:23916200-23948800 Weak transcription Colonic Mucosa Colon
22 chr3:23916600-23932800 Weak transcription Fetal Muscle Trunk muscle
23 chr3:23917200-23931600 Weak transcription H9 Cell Line embryonic stem cell
24 chr3:23917600-23931400 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr3:23918600-23931600 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr3:23918800-23928800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr3:23919000-23923200 Weak transcription Spleen Spleen
28 chr3:23919000-23940000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr3:23919200-23923400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:23919200-23930200 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr3:23919200-23931000 Weak transcription Fetal Muscle Leg muscle
32 chr3:23919200-23931400 Weak transcription Fetal Lung lung
33 chr3:23919200-23935800 Weak transcription Psoas Muscle Psoas
34 chr3:23919200-23938400 Weak transcription Ovary ovary
35 chr3:23919200-23940200 Weak transcription Pancreas Pancrea
36 chr3:23919400-23923200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr3:23919400-23923200 Weak transcription Primary monocytes fromperipheralblood blood
38 chr3:23919400-23926400 Weak transcription HMEC breast
39 chr3:23919400-23926800 Weak transcription A549 lung
40 chr3:23919400-23928600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr3:23919400-23930400 Weak transcription Brain Hippocampus Middle brain
42 chr3:23919400-23930400 Weak transcription NHEK skin
43 chr3:23919400-23930600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr3:23919400-23931600 Weak transcription Brain Anterior Caudate brain
45 chr3:23919400-23932400 Weak transcription Brain Cingulate Gyrus brain
46 chr3:23919600-23923800 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr3:23919600-23929000 Weak transcription HSMMtube muscle
48 chr3:23919600-23930000 Weak transcription HSMM muscle
49 chr3:23919600-23931000 Weak transcription NHDF-Ad bronchial
50 chr3:23919600-23935400 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015