The 2.0 version of rSNPBase

Variant report

Variant rs72627042
Chromosome Location chr3:23906287-23906288
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:23879000-23907400 Weak transcription K562 blood
3 chr3:23893600-23906400 Weak transcription Aorta Aorta
4 chr3:23893600-23906600 Weak transcription Colonic Mucosa Colon
5 chr3:23898200-23907000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr3:23898400-23907200 Weak transcription Stomach Mucosa stomach
7 chr3:23899000-23907000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr3:23899400-23907000 Weak transcription H9 Cell Line embryonic stem cell
9 chr3:23899400-23907200 Weak transcription NH-A brain
10 chr3:23900800-23907000 Weak transcription Fetal Kidney kidney
11 chr3:23901000-23906400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr3:23901000-23906800 Weak transcription NHDF-Ad bronchial
13 chr3:23901000-23907400 Weak transcription Placenta Amnion Placenta Amnion
14 chr3:23901200-23906400 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr3:23901200-23906400 Weak transcription Adipose Nuclei Adipose
16 chr3:23901200-23906400 Weak transcription Brain Angular Gyrus brain
17 chr3:23901200-23906400 Weak transcription Brain Cingulate Gyrus brain
18 chr3:23901200-23906400 Weak transcription Gastric stomach
19 chr3:23901200-23906600 Weak transcription Rectal Smooth Muscle rectum
20 chr3:23901200-23907000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr3:23901200-23907200 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr3:23901200-23907200 Weak transcription HMEC breast
23 chr3:23901200-23907400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr3:23901200-23914800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr3:23901200-23915400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr3:23901200-23915400 Weak transcription HSMM muscle
27 chr3:23901200-23942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr3:23901400-23906400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr3:23901400-23906400 Weak transcription Placenta Placenta
30 chr3:23901400-23906800 Weak transcription Small Intestine intestine
31 chr3:23901400-23907000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr3:23901400-23915200 Weak transcription NHEK skin
33 chr3:23901600-23906600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr3:23901600-23906600 Weak transcription HSMMtube muscle
35 chr3:23901800-23906400 Weak transcription Colon Smooth Muscle Colon
36 chr3:23901800-23906400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr3:23901800-23906600 Weak transcription Spleen Spleen
38 chr3:23901800-23906800 Weak transcription Right Ventricle heart
39 chr3:23901800-23907000 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr3:23901800-23907000 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr3:23901800-23907400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr3:23901800-23928800 Weak transcription Primary T cells fromperipheralblood blood
43 chr3:23901800-23935600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr3:23902000-23906400 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr3:23902000-23906600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr3:23902000-23907000 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr3:23902200-23907200 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr3:23902800-23906600 Weak transcription Stomach Smooth Muscle stomach
49 chr3:23902800-23907000 Weak transcription Primary hematopoietic stem cells blood
50 chr3:23903200-23907200 Weak transcription ES-WA7 Cell Line embryonic stem cell

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Last update: Aug 31, 2015