The 2.0 version of rSNPBase

Variant report

Variant rs72627031
Chromosome Location chr3:23899621-23899622
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23855000-23900200 Weak transcription HSMM muscle
2 chr3:23857600-23900000 Weak transcription Fetal Muscle Trunk muscle
3 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:23878600-23900400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr3:23878800-23900200 Weak transcription Fetal Kidney kidney
6 chr3:23879000-23907400 Weak transcription K562 blood
7 chr3:23882200-23905600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr3:23882600-23900600 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr3:23882800-23906000 Weak transcription HepG2 liver
10 chr3:23888200-23900600 Weak transcription Ovary ovary
11 chr3:23890600-23902800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr3:23892200-23900400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr3:23893000-23900400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr3:23893600-23900200 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr3:23893600-23900400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr3:23893600-23906400 Weak transcription Aorta Aorta
17 chr3:23893600-23906600 Weak transcription Colonic Mucosa Colon
18 chr3:23894400-23903000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr3:23894600-23900800 Weak transcription Esophagus oesophagus
20 chr3:23894600-23902400 Weak transcription Brain Germinal Matrix brain
21 chr3:23894600-23903000 Weak transcription Fetal Intestine Large intestine
22 chr3:23894800-23900600 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr3:23894800-23902800 Weak transcription Fetal Intestine Small intestine
24 chr3:23895000-23900600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr3:23895000-23903400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr3:23895400-23900600 Weak transcription HSMMtube muscle
27 chr3:23897400-23901000 Enhancers Primary monocytes fromperipheralblood blood
28 chr3:23897400-23901200 Enhancers Primary hematopoietic stem cells short term culture blood
29 chr3:23897400-23901800 Enhancers Primary T helper cells fromperipheralblood blood
30 chr3:23897400-23902600 Enhancers Primary B cells from peripheral blood blood
31 chr3:23897400-23902600 Enhancers Thymus Thymus
32 chr3:23897600-23901800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr3:23897600-23901800 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr3:23897800-23900000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr3:23897800-23900800 Enhancers Dnd41 blood
36 chr3:23897800-23901200 Enhancers Primary T helper cells PMA-I stimulated --
37 chr3:23897800-23901200 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr3:23897800-23901600 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr3:23897800-23902000 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr3:23898000-23901800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
41 chr3:23898000-23902200 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr3:23898000-23902600 Enhancers Fetal Thymus thymus
43 chr3:23898000-23902600 Enhancers Skeletal Muscle Male skeletal muscle
44 chr3:23898000-23904800 Enhancers Skeletal Muscle Female skeletal muscle
45 chr3:23898200-23900600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr3:23898200-23901800 Enhancers Primary T cells fromperipheralblood blood
47 chr3:23898200-23901800 Enhancers Left Ventricle heart
48 chr3:23898200-23902000 Enhancers Psoas Muscle Psoas
49 chr3:23898200-23907000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr3:23898400-23900400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015