The 2.0 version of rSNPBase

Variant report

Variant rs72627004
Chromosome Location chr3:23869889-23869890
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23853000-23876000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:23853000-23876000 Weak transcription Fetal Stomach stomach
3 chr3:23853000-23882000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr3:23853000-23887400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr3:23853200-23893200 Weak transcription Thymus Thymus
6 chr3:23853400-23885600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr3:23854200-23870000 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr3:23854200-23871400 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr3:23854400-23876800 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr3:23854600-23871000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr3:23854600-23871200 Weak transcription Fetal Brain Male brain
12 chr3:23854800-23871000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr3:23855000-23900200 Weak transcription HSMM muscle
14 chr3:23857600-23870800 Weak transcription Small Intestine intestine
15 chr3:23857600-23894000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr3:23857600-23900000 Weak transcription Fetal Muscle Trunk muscle
17 chr3:23861800-23871000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr3:23862000-23871000 Weak transcription Fetal Muscle Leg muscle
19 chr3:23862000-23876400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr3:23862000-23881400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr3:23862000-23882000 Weak transcription Fetal Intestine Large intestine
22 chr3:23862800-23871000 Weak transcription Primary T cells from cord blood blood
23 chr3:23863000-23877800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr3:23863000-23878000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr3:23863200-23874000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr3:23865200-23871000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr3:23865400-23870800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr3:23865600-23877800 Weak transcription Stomach Smooth Muscle stomach
29 chr3:23866000-23872000 Enhancers Primary T helper cells fromperipheralblood blood
30 chr3:23866000-23872400 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr3:23866400-23871000 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr3:23866400-23873400 Weak transcription Fetal Intestine Small intestine
33 chr3:23866800-23874000 Weak transcription Spleen Spleen
34 chr3:23866800-23878000 Weak transcription Liver Liver
35 chr3:23867000-23872200 Weak transcription HMEC breast
36 chr3:23867000-23877400 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr3:23867000-23881400 Weak transcription HepG2 liver
38 chr3:23867200-23870800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr3:23867200-23872200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr3:23868000-23870800 Weak transcription Pancreas Pancrea
41 chr3:23868000-23873200 Weak transcription Lung lung
42 chr3:23868000-23873600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr3:23868000-23875800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr3:23868000-23877800 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr3:23868000-23884800 Weak transcription NHDF-Ad bronchial
46 chr3:23868000-23897800 Weak transcription HUVEC blood vessel
47 chr3:23868200-23870000 Weak transcription Primary B cells from peripheral blood blood
48 chr3:23868200-23870200 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr3:23868200-23870400 Weak transcription Psoas Muscle Psoas
50 chr3:23868200-23870800 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015