The 2.0 version of rSNPBase

Variant report

Variant rs72627028
Chromosome Location chr3:23896248-23896249
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23855000-23900200 Weak transcription HSMM muscle
2 chr3:23857600-23900000 Weak transcription Fetal Muscle Trunk muscle
3 chr3:23868000-23897800 Weak transcription HUVEC blood vessel
4 chr3:23871200-23899000 Weak transcription Pancreas Pancrea
5 chr3:23871400-23897400 Weak transcription Primary T cells from cord blood blood
6 chr3:23872000-23897400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr3:23873800-23898000 Weak transcription NHEK skin
8 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr3:23878400-23898000 Weak transcription Liver Liver
10 chr3:23878600-23900400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr3:23878800-23900200 Weak transcription Fetal Kidney kidney
12 chr3:23879000-23898000 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr3:23879000-23898200 Weak transcription Right Atrium heart
14 chr3:23879000-23907400 Weak transcription K562 blood
15 chr3:23879200-23898200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr3:23882200-23897800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr3:23882200-23905600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr3:23882400-23897800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr3:23882400-23898000 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr3:23882600-23900600 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr3:23882800-23898000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr3:23882800-23906000 Weak transcription HepG2 liver
23 chr3:23884000-23897800 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr3:23884800-23897800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr3:23885000-23898000 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr3:23885400-23898000 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr3:23885800-23898000 Weak transcription NHLF lung
28 chr3:23887000-23897800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr3:23887000-23898600 Weak transcription Duodenum Mucosa Duodenum
30 chr3:23887200-23897400 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr3:23887600-23897400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr3:23888200-23900600 Weak transcription Ovary ovary
33 chr3:23890400-23897800 Weak transcription H1 Cell Line embryonic stem cell
34 chr3:23890600-23902800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr3:23891200-23897400 Weak transcription Adipose Nuclei Adipose
36 chr3:23891800-23897800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr3:23891800-23898000 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr3:23892200-23900400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr3:23892400-23898200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr3:23893000-23900400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr3:23893200-23897400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr3:23893200-23899000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr3:23893400-23897800 Weak transcription A549 lung
44 chr3:23893600-23897600 Weak transcription Fetal Muscle Leg muscle
45 chr3:23893600-23897800 Weak transcription Dnd41 blood
46 chr3:23893600-23898200 Weak transcription Primary T cells fromperipheralblood blood
47 chr3:23893600-23898200 Weak transcription Left Ventricle heart
48 chr3:23893600-23898200 Weak transcription Spleen Spleen
49 chr3:23893600-23900200 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr3:23893600-23900400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015