The 2.0 version of rSNPBase

Variant report

Variant rs72627016
Chromosome Location chr3:23883417-23883418
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23853000-23887400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:23853200-23893200 Weak transcription Thymus Thymus
3 chr3:23853400-23885600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr3:23855000-23900200 Weak transcription HSMM muscle
5 chr3:23857600-23894000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr3:23857600-23900000 Weak transcription Fetal Muscle Trunk muscle
7 chr3:23868000-23884800 Weak transcription NHDF-Ad bronchial
8 chr3:23868000-23897800 Weak transcription HUVEC blood vessel
9 chr3:23868200-23883600 Weak transcription Left Ventricle heart
10 chr3:23868200-23893000 Weak transcription Fetal Thymus thymus
11 chr3:23871200-23883600 Weak transcription Ovary ovary
12 chr3:23871200-23899000 Weak transcription Pancreas Pancrea
13 chr3:23871400-23897400 Weak transcription Primary T cells from cord blood blood
14 chr3:23872000-23897400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr3:23872600-23886800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr3:23873000-23887800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:23873800-23893000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr3:23873800-23898000 Weak transcription NHEK skin
19 chr3:23874400-23888000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr3:23876200-23883600 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:23878200-23883600 Weak transcription A549 lung
23 chr3:23878400-23887800 Weak transcription Right Ventricle heart
24 chr3:23878400-23898000 Weak transcription Liver Liver
25 chr3:23878600-23884800 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr3:23878600-23900400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr3:23878800-23893800 Weak transcription Fetal Stomach stomach
28 chr3:23878800-23900200 Weak transcription Fetal Kidney kidney
29 chr3:23879000-23886000 Weak transcription Brain Substantia Nigra brain
30 chr3:23879000-23898000 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr3:23879000-23898200 Weak transcription Right Atrium heart
32 chr3:23879000-23907400 Weak transcription K562 blood
33 chr3:23879200-23898200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr3:23879400-23885200 Weak transcription Brain Inferior Temporal Lobe brain
35 chr3:23879400-23886200 Weak transcription Fetal Lung lung
36 chr3:23879400-23893000 Weak transcription Primary B cells from cord blood blood
37 chr3:23879600-23886600 Weak transcription Primary B cells from peripheral blood blood
38 chr3:23879800-23884600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr3:23880000-23885000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:23880400-23886600 Weak transcription Primary hematopoietic stem cells blood
41 chr3:23880400-23892000 Weak transcription Fetal Intestine Small intestine
42 chr3:23880600-23886200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr3:23882000-23888200 Weak transcription HMEC breast
44 chr3:23882200-23885000 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr3:23882200-23895000 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr3:23882200-23897800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr3:23882200-23905600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr3:23882400-23883800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr3:23882400-23884600 Weak transcription Psoas Muscle Psoas
50 chr3:23882400-23884800 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015