The 2.0 version of rSNPBase

Variant report

Variant rs72625902
Chromosome Location chr3:23868014-23868015
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23853000-23868400 Weak transcription HSMMtube muscle
2 chr3:23853000-23876000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr3:23853000-23876000 Weak transcription Fetal Stomach stomach
4 chr3:23853000-23882000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr3:23853000-23887400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr3:23853200-23893200 Weak transcription Thymus Thymus
7 chr3:23853400-23885600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr3:23854200-23870000 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr3:23854200-23871400 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr3:23854400-23876800 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr3:23854600-23871000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr3:23854600-23871200 Weak transcription Fetal Brain Male brain
13 chr3:23854800-23871000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr3:23855000-23869600 Weak transcription Dnd41 blood
15 chr3:23855000-23900200 Weak transcription HSMM muscle
16 chr3:23857600-23870800 Weak transcription Small Intestine intestine
17 chr3:23857600-23894000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr3:23857600-23900000 Weak transcription Fetal Muscle Trunk muscle
19 chr3:23861000-23868800 Enhancers HUES6 Cell Line embryonic stem cell
20 chr3:23861800-23868400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr3:23861800-23871000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:23862000-23871000 Weak transcription Fetal Muscle Leg muscle
23 chr3:23862000-23876400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr3:23862000-23881400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr3:23862000-23882000 Weak transcription Fetal Intestine Large intestine
26 chr3:23862800-23869000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr3:23862800-23871000 Weak transcription Primary T cells from cord blood blood
28 chr3:23863000-23877800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr3:23863000-23878000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr3:23863200-23874000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr3:23863400-23868200 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr3:23865000-23868600 Enhancers Primary B cells from cord blood blood
33 chr3:23865200-23868200 Enhancers Primary B cells from peripheral blood blood
34 chr3:23865200-23871000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr3:23865400-23868600 Enhancers Primary hematopoietic stem cells short term culture blood
36 chr3:23865400-23869600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr3:23865400-23870800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr3:23865600-23868200 Enhancers Primary T helper cells PMA-I stimulated --
39 chr3:23865600-23868200 Enhancers Skeletal Muscle Female skeletal muscle
40 chr3:23865600-23868200 Enhancers Stomach Mucosa stomach
41 chr3:23865600-23877800 Weak transcription Stomach Smooth Muscle stomach
42 chr3:23865800-23868200 Enhancers Right Ventricle heart
43 chr3:23866000-23868200 Enhancers H1 Cell Line embryonic stem cell
44 chr3:23866000-23868200 Enhancers Duodenum Smooth Muscle Duodenum
45 chr3:23866000-23868200 Enhancers Gastric stomach
46 chr3:23866000-23869600 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr3:23866000-23872000 Enhancers Primary T helper cells fromperipheralblood blood
48 chr3:23866000-23872400 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr3:23866200-23868200 Enhancers Left Ventricle heart
50 chr3:23866200-23868200 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015