The 2.0 version of rSNPBase

Variant report

Variant rs72625900
Chromosome Location chr3:23861353-23861354
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23853000-23861400 Weak transcription H9 Cell Line embryonic stem cell
2 chr3:23853000-23862400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr3:23853000-23862600 Weak transcription Ovary ovary
4 chr3:23853000-23862800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:23853000-23865800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr3:23853000-23866200 Weak transcription Placenta Amnion Placenta Amnion
7 chr3:23853000-23867200 Weak transcription Aorta Aorta
8 chr3:23853000-23867800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr3:23853000-23867800 Weak transcription Primary T cells fromperipheralblood blood
10 chr3:23853000-23867800 Weak transcription Esophagus oesophagus
11 chr3:23853000-23867800 Weak transcription Fetal Brain Female brain
12 chr3:23853000-23867800 Weak transcription Right Atrium heart
13 chr3:23853000-23868000 Weak transcription NH-A brain
14 chr3:23853000-23868400 Weak transcription HSMMtube muscle
15 chr3:23853000-23876000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr3:23853000-23876000 Weak transcription Fetal Stomach stomach
17 chr3:23853000-23882000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr3:23853000-23887400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr3:23853200-23893200 Weak transcription Thymus Thymus
20 chr3:23853400-23864400 Weak transcription H1 Cell Line embryonic stem cell
21 chr3:23853400-23866000 Weak transcription HMEC breast
22 chr3:23853400-23867400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr3:23853400-23885600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr3:23853600-23866000 Weak transcription Liver Liver
25 chr3:23853800-23865200 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr3:23854000-23867400 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr3:23854200-23870000 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr3:23854200-23871400 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr3:23854400-23861400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr3:23854400-23862400 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr3:23854400-23865200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr3:23854400-23865200 Weak transcription Rectal Smooth Muscle rectum
33 chr3:23854400-23867800 Weak transcription Fetal Kidney kidney
34 chr3:23854400-23876800 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr3:23854600-23862200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr3:23854600-23866600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr3:23854600-23871000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr3:23854600-23871200 Weak transcription Fetal Brain Male brain
39 chr3:23854800-23861800 Weak transcription NHEK skin
40 chr3:23854800-23866600 Weak transcription HepG2 liver
41 chr3:23854800-23871000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr3:23855000-23869600 Weak transcription Dnd41 blood
43 chr3:23855000-23900200 Weak transcription HSMM muscle
44 chr3:23856400-23867800 Weak transcription Hela-S3 cervix
45 chr3:23856600-23866000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr3:23857400-23865200 Weak transcription Fetal Lung lung
47 chr3:23857600-23861400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:23857600-23864800 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr3:23857600-23866600 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr3:23857600-23870800 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015