The 2.0 version of rSNPBase

Variant report

Variant rs72627039
Chromosome Location chr3:23903759-23903760
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:23876800-23906800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:23879000-23907400 Weak transcription K562 blood
3 chr3:23882200-23905600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr3:23882800-23906000 Weak transcription HepG2 liver
5 chr3:23893600-23906400 Weak transcription Aorta Aorta
6 chr3:23893600-23906600 Weak transcription Colonic Mucosa Colon
7 chr3:23898000-23904800 Enhancers Skeletal Muscle Female skeletal muscle
8 chr3:23898200-23907000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr3:23898400-23907200 Weak transcription Stomach Mucosa stomach
10 chr3:23899000-23907000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr3:23899400-23905600 Weak transcription Liver Liver
12 chr3:23899400-23906200 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr3:23899400-23906200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr3:23899400-23907000 Weak transcription H9 Cell Line embryonic stem cell
15 chr3:23899400-23907200 Weak transcription NH-A brain
16 chr3:23900800-23906200 Weak transcription H1 Cell Line embryonic stem cell
17 chr3:23900800-23906200 Weak transcription Fetal Muscle Trunk muscle
18 chr3:23900800-23907000 Weak transcription Fetal Kidney kidney
19 chr3:23901000-23905400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr3:23901000-23905600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr3:23901000-23905600 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr3:23901000-23906000 Weak transcription NHLF lung
23 chr3:23901000-23906400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr3:23901000-23906800 Weak transcription NHDF-Ad bronchial
25 chr3:23901000-23907400 Weak transcription Placenta Amnion Placenta Amnion
26 chr3:23901200-23904000 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr3:23901200-23904600 Weak transcription Muscle Satellite Cultured Cells --
28 chr3:23901200-23906200 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr3:23901200-23906200 Weak transcription Brain Anterior Caudate brain
30 chr3:23901200-23906400 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr3:23901200-23906400 Weak transcription Adipose Nuclei Adipose
32 chr3:23901200-23906400 Weak transcription Brain Angular Gyrus brain
33 chr3:23901200-23906400 Weak transcription Brain Cingulate Gyrus brain
34 chr3:23901200-23906400 Weak transcription Gastric stomach
35 chr3:23901200-23906600 Weak transcription Rectal Smooth Muscle rectum
36 chr3:23901200-23907000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr3:23901200-23907200 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr3:23901200-23907200 Weak transcription HMEC breast
39 chr3:23901200-23907400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr3:23901200-23914800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr3:23901200-23915400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr3:23901200-23915400 Weak transcription HSMM muscle
43 chr3:23901200-23942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr3:23901400-23903800 Strong transcription Primary B cells from cord blood blood
45 chr3:23901400-23906200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr3:23901400-23906400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr3:23901400-23906400 Weak transcription Placenta Placenta
48 chr3:23901400-23906800 Weak transcription Small Intestine intestine
49 chr3:23901400-23907000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr3:23901400-23915200 Weak transcription NHEK skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015